Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0490 and Dsui_0491 overlap by 4 nucleotides Dsui_0491 and Dsui_0492 are separated by 144 nucleotides Dsui_0492 and Dsui_0493 are separated by 5 nucleotides
Dsui_0490: Dsui_0490 - putative ATPase, at 492,341 to 493,861
_0490
Dsui_0491: Dsui_0491 - putative oxygen-independent coproporphyrinogen III oxidase, at 493,858 to 495,096
_0491
Dsui_0492: Dsui_0492 - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family, at 495,241 to 495,831
_0492
Dsui_0493: Dsui_0493 - hypothetical protein, at 495,837 to 496,745
_0493
Position (kb) 493
494
495
496 Strain fitness (log2 ratio) -2
-1
0
1
2 at 492.907 kb on - strand, within Dsui_0490 at 492.927 kb on - strand, within Dsui_0490 at 492.967 kb on + strand, within Dsui_0490 at 492.977 kb on + strand, within Dsui_0490 at 493.086 kb on + strand, within Dsui_0490 at 493.238 kb on + strand, within Dsui_0490 at 493.304 kb on - strand, within Dsui_0490 at 493.335 kb on - strand, within Dsui_0490 at 493.357 kb on - strand, within Dsui_0490 at 493.358 kb on - strand, within Dsui_0490 at 493.598 kb on - strand, within Dsui_0490 at 493.627 kb on + strand, within Dsui_0490 at 493.635 kb on - strand, within Dsui_0490 at 493.650 kb on - strand, within Dsui_0490 at 493.829 kb on + strand at 493.846 kb on - strand at 493.942 kb on + strand at 494.018 kb on - strand, within Dsui_0491 at 494.085 kb on + strand, within Dsui_0491 at 494.169 kb on - strand, within Dsui_0491 at 494.208 kb on - strand, within Dsui_0491 at 494.426 kb on - strand, within Dsui_0491 at 494.495 kb on + strand at 494.500 kb on + strand, within Dsui_0491 at 494.573 kb on + strand, within Dsui_0491 at 494.593 kb on - strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.609 kb on + strand, within Dsui_0491 at 494.610 kb on - strand, within Dsui_0491 at 494.715 kb on + strand, within Dsui_0491 at 494.755 kb on + strand, within Dsui_0491 at 494.800 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.810 kb on - strand, within Dsui_0491 at 494.855 kb on - strand, within Dsui_0491 at 494.923 kb on + strand, within Dsui_0491 at 494.980 kb on + strand at 495.155 kb on + strand at 495.202 kb on - strand at 495.238 kb on + strand at 495.487 kb on - strand, within Dsui_0492 at 495.598 kb on + strand, within Dsui_0492 at 495.765 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.772 kb on - strand, within Dsui_0492 at 495.775 kb on + strand at 495.808 kb on - strand at 495.828 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.833 kb on + strand at 495.841 kb on - strand at 495.841 kb on - strand at 496.081 kb on - strand, within Dsui_0493
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 492,907 - Dsui_0490 0.37 +0.5 492,927 - Dsui_0490 0.39 -1.2 492,967 + Dsui_0490 0.41 +0.6 492,977 + Dsui_0490 0.42 -0.4 493,086 + Dsui_0490 0.49 +0.8 493,238 + Dsui_0490 0.59 +0.0 493,304 - Dsui_0490 0.63 -0.4 493,335 - Dsui_0490 0.65 -0.3 493,357 - Dsui_0490 0.67 +0.2 493,358 - Dsui_0490 0.67 +0.2 493,598 - Dsui_0490 0.83 -0.1 493,627 + Dsui_0490 0.85 -0.3 493,635 - Dsui_0490 0.85 -2.1 493,650 - Dsui_0490 0.86 -0.0 493,829 + +0.0 493,846 - +0.3 493,942 + -1.4 494,018 - Dsui_0491 0.13 +0.5 494,085 + Dsui_0491 0.18 +0.6 494,169 - Dsui_0491 0.25 -0.8 494,208 - Dsui_0491 0.28 +1.1 494,426 - Dsui_0491 0.46 -0.2 494,495 + -0.4 494,500 + Dsui_0491 0.52 -0.7 494,573 + Dsui_0491 0.58 +1.1 494,593 - Dsui_0491 0.59 -0.8 494,609 + Dsui_0491 0.61 +0.1 494,609 + Dsui_0491 0.61 -1.4 494,610 - Dsui_0491 0.61 -0.5 494,715 + Dsui_0491 0.69 -0.8 494,755 + Dsui_0491 0.72 -1.4 494,800 - Dsui_0491 0.76 -0.4 494,810 - Dsui_0491 0.77 +0.9 494,810 - Dsui_0491 0.77 +1.2 494,810 - Dsui_0491 0.77 -0.2 494,855 - Dsui_0491 0.80 -0.8 494,923 + Dsui_0491 0.86 -1.6 494,980 + -0.3 495,155 + +1.1 495,202 - +0.1 495,238 + -0.8 495,487 - Dsui_0492 0.42 +0.4 495,598 + Dsui_0492 0.60 -0.0 495,765 - Dsui_0492 0.89 -0.7 495,772 - Dsui_0492 0.90 -0.2 495,772 - Dsui_0492 0.90 -0.5 495,775 + -0.5 495,808 - -0.1 495,828 + -0.1 495,833 + -1.2 495,833 + -0.1 495,833 + -0.0 495,841 - +1.8 495,841 - -0.1 496,081 - Dsui_0493 0.27 -0.9
Or see this region's nucleotide sequence