Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0097 and Dsui_0098 are separated by 88 nucleotides Dsui_0098 and Dsui_0099 are separated by 3 nucleotides Dsui_0099 and Dsui_0100 overlap by 4 nucleotides Dsui_0100 and Dsui_0101 are separated by 166 nucleotides
Dsui_0097: Dsui_0097 - putative metal-binding protein, at 97,310 to 97,750
_0097
Dsui_0098: Dsui_0098 - Uncharacterized protein family UPF0057, at 97,839 to 98,033
_0098
Dsui_0099: Dsui_0099 - putative periplasmic or secreted lipoprotein, at 98,037 to 98,696
_0099
Dsui_0100: Dsui_0100 - phosphoheptose isomerase, at 98,693 to 99,286
_0100
Dsui_0101: Dsui_0101 - exonuclease, DNA polymerase III, epsilon subunit family, at 99,453 to 100,919
_0101
Position (kb) 98
99
100 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 97.709 kb on - strand at 97.739 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.744 kb on + strand at 97.752 kb on - strand at 98.004 kb on + strand, within Dsui_0098 at 98.066 kb on + strand at 98.066 kb on + strand at 98.098 kb on + strand at 98.106 kb on - strand, within Dsui_0099 at 98.158 kb on - strand, within Dsui_0099 at 98.213 kb on + strand, within Dsui_0099 at 98.243 kb on - strand, within Dsui_0099 at 98.407 kb on + strand, within Dsui_0099 at 98.407 kb on + strand, within Dsui_0099 at 98.530 kb on - strand, within Dsui_0099 at 98.710 kb on + strand at 99.298 kb on - strand at 99.339 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.423 kb on - strand at 99.431 kb on + strand at 99.454 kb on - strand at 99.504 kb on + strand at 99.512 kb on - strand at 99.512 kb on - strand at 99.589 kb on - strand at 99.594 kb on + strand at 99.651 kb on - strand, within Dsui_0101 at 99.718 kb on - strand, within Dsui_0101 at 99.720 kb on + strand, within Dsui_0101 at 99.728 kb on - strand, within Dsui_0101 at 99.731 kb on + strand, within Dsui_0101 at 99.771 kb on + strand, within Dsui_0101 at 99.830 kb on + strand, within Dsui_0101 at 99.836 kb on - strand, within Dsui_0101 at 99.838 kb on + strand, within Dsui_0101 at 99.838 kb on - strand, within Dsui_0101 at 99.846 kb on - strand, within Dsui_0101 at 99.846 kb on - strand, within Dsui_0101 at 99.870 kb on - strand, within Dsui_0101 at 99.960 kb on - strand, within Dsui_0101 at 100.002 kb on - strand, within Dsui_0101 at 100.004 kb on + strand, within Dsui_0101 at 100.012 kb on - strand, within Dsui_0101 at 100.024 kb on + strand, within Dsui_0101 at 100.032 kb on - strand, within Dsui_0101 at 100.032 kb on - strand, within Dsui_0101 at 100.096 kb on + strand, within Dsui_0101 at 100.104 kb on - strand, within Dsui_0101 at 100.204 kb on - strand, within Dsui_0101 at 100.211 kb on + strand, within Dsui_0101 at 100.240 kb on - strand, within Dsui_0101 at 100.269 kb on - strand, within Dsui_0101
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 97,709 - +0.2 97,739 + +0.0 97,744 + +0.3 97,744 + +0.1 97,744 + -0.7 97,744 + -0.2 97,752 - +0.1 98,004 + Dsui_0098 0.85 +0.3 98,066 + +0.0 98,066 + +0.2 98,098 + -0.7 98,106 - Dsui_0099 0.10 +0.2 98,158 - Dsui_0099 0.18 -2.1 98,213 + Dsui_0099 0.27 -1.2 98,243 - Dsui_0099 0.31 -3.3 98,407 + Dsui_0099 0.56 -1.0 98,407 + Dsui_0099 0.56 -1.6 98,530 - Dsui_0099 0.75 -1.5 98,710 + -2.5 99,298 - +0.3 99,339 - +0.1 99,423 - -0.0 99,423 - -0.9 99,423 - +1.5 99,423 - +0.8 99,431 + +0.1 99,454 - +0.5 99,504 + +0.6 99,512 - +0.8 99,512 - +0.7 99,589 - +0.2 99,594 + +0.3 99,651 - Dsui_0101 0.13 +2.2 99,718 - Dsui_0101 0.18 +0.3 99,720 + Dsui_0101 0.18 -0.6 99,728 - Dsui_0101 0.19 +0.8 99,731 + Dsui_0101 0.19 -0.2 99,771 + Dsui_0101 0.22 +0.1 99,830 + Dsui_0101 0.26 +0.9 99,836 - Dsui_0101 0.26 -0.1 99,838 + Dsui_0101 0.26 +0.6 99,838 - Dsui_0101 0.26 -0.3 99,846 - Dsui_0101 0.27 +0.5 99,846 - Dsui_0101 0.27 +1.6 99,870 - Dsui_0101 0.28 -0.5 99,960 - Dsui_0101 0.35 +0.3 100,002 - Dsui_0101 0.37 +0.2 100,004 + Dsui_0101 0.38 +0.7 100,012 - Dsui_0101 0.38 +0.2 100,024 + Dsui_0101 0.39 -0.4 100,032 - Dsui_0101 0.39 -0.4 100,032 - Dsui_0101 0.39 -0.6 100,096 + Dsui_0101 0.44 +1.3 100,104 - Dsui_0101 0.44 -0.3 100,204 - Dsui_0101 0.51 +0.3 100,211 + Dsui_0101 0.52 +0.1 100,240 - Dsui_0101 0.54 -0.5 100,269 - Dsui_0101 0.56 -0.2
Or see this region's nucleotide sequence