Strain Fitness in Shewanella amazonensis SB2B around Sama_2897

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
3,442,776	-		Sama_2896	0.76	+1.5
3,442,790	+		Sama_2896	0.77	-0.2
3,442,791	-		Sama_2896	0.77	+0.3
3,442,830	+		Sama_2896	0.79	-1.3
3,442,830	+		Sama_2896	0.79	-0.7
3,442,830	+		Sama_2896	0.79	+1.0
3,442,831	-		Sama_2896	0.79	-0.5
3,442,831	-		Sama_2896	0.79	-2.2
3,442,831	-		Sama_2896	0.79	-1.5
3,442,831	-		Sama_2896	0.79	-0.3
3,442,944	-		Sama_2896	0.83	-1.0
3,442,950	+		Sama_2896	0.83	-0.5
3,442,964	+		Sama_2896	0.84	-2.2
3,442,964	+		Sama_2896	0.84	+0.7
3,442,964	+		Sama_2896	0.84	-1.4
3,442,964	+		Sama_2896	0.84	+0.3
3,442,965	-		Sama_2896	0.84	-0.4
3,442,965	-		Sama_2896	0.84	-0.5
3,442,965	-		Sama_2896	0.84	-0.4
3,442,965	-		Sama_2896	0.84	+1.3
3,442,965	-		Sama_2896	0.84	+0.3
3,443,036	+		Sama_2896	0.86	-1.7
3,443,037	-		Sama_2896	0.87	+0.3
3,443,042	+		Sama_2896	0.87	-0.4
3,443,042	+		Sama_2896	0.87	-1.9
3,443,043	-		Sama_2896	0.87	-1.4
3,443,043	-		Sama_2896	0.87	-0.9
3,443,043	-		Sama_2896	0.87	-1.9
3,443,044	+		Sama_2896	0.87	-0.6
3,443,044	+		Sama_2896	0.87	-1.5
3,443,044	+		Sama_2896	0.87	+0.2
3,443,044	+		Sama_2896	0.87	+0.5
3,443,044	+		Sama_2896	0.87	-0.7
3,443,044	+		Sama_2896	0.87	-0.1
3,443,044	+		Sama_2896	0.87	-0.9
3,443,044	+		Sama_2896	0.87	-1.3
3,443,045	-		Sama_2896	0.87	-0.5
3,443,045	-		Sama_2896	0.87	+0.1
3,443,045	-		Sama_2896	0.87	+0.0
3,443,045	-		Sama_2896	0.87	-0.1
3,443,045	-		Sama_2896	0.87	-0.2
3,443,045	-		Sama_2896	0.87	-0.3
3,443,055	+		Sama_2896	0.87	+0.2
3,443,055	+		Sama_2896	0.87	+1.7
3,443,055	+		Sama_2896	0.87	-0.3
3,443,055	+		Sama_2896	0.87	-0.2
3,443,055	+		Sama_2896	0.87	-0.9
3,443,055	+		Sama_2896	0.87	+0.1
3,443,055	+		Sama_2896	0.87	-0.7
3,443,056	-		Sama_2896	0.87	+0.7
3,443,056	-		Sama_2896	0.87	+0.5
3,443,056	-		Sama_2896	0.87	-1.1
3,443,056	-		Sama_2896	0.87	+0.1
3,443,056	-		Sama_2896	0.87	-0.5
3,443,056	-		Sama_2896	0.87	-0.9
3,443,056	-		Sama_2896	0.87	-0.0
3,443,088	-		Sama_2896	0.88	-0.2
3,443,088	-		Sama_2896	0.88	+0.5
3,443,115	+		Sama_2896	0.90	-0.8
3,443,115	+		Sama_2896	0.90	-1.0
3,443,115	+		Sama_2896	0.90	+1.0
3,443,116	-		Sama_2896	0.90	-0.4
3,443,116	-		Sama_2896	0.90	-1.2
3,443,116	-		Sama_2896	0.90	-1.0
3,443,116	-		Sama_2896	0.90	-0.5
3,443,116	-		Sama_2896	0.90	-0.2
3,443,192	+				+0.3
3,443,193	-				-0.5
3,443,193	-				+1.0
3,443,193	-				-0.3
3,443,196	-				+1.3
3,443,310	-				-0.9
3,443,319	+				-0.2
3,443,319	+				+0.7
3,443,319	+				-0.3
3,443,319	+				-0.3
3,443,319	+				+0.9
3,443,320	-				-0.2
3,443,320	-				+1.9
3,443,320	-				-0.2
3,443,320	-				+0.4
3,443,320	-				+0.3
3,443,320	-				-0.2
3,443,320	-				+0.3
3,443,320	-				-0.7
3,443,320	-				+0.9
3,443,348	+				+0.4
3,443,349	-				+1.0
3,443,349	-				+1.6
3,443,349	-				-0.3
3,443,351	+				+0.1
3,443,351	+				-1.2
3,443,352	-				+1.3
3,443,436	-				+0.9
3,443,436	-				+0.9
3,443,512	+				+0.4
3,443,516	+				+0.0
3,443,517	-				+1.0
3,443,527	+				+0.3
3,443,540	+				-0.9
3,443,540	+				-1.1
3,443,572	+				-0.0
3,443,573	-				+0.7
3,443,693	+				+0.2
3,443,720	+				-0.0
3,443,720	+				+0.3
3,443,721	-				-1.0
3,443,731	+				+0.3
3,443,731	+				-0.3
3,443,731	+				+0.5
3,443,732	-				+2.6
3,443,736	-				+0.5
3,443,736	-				-0.5
3,443,741	+				-0.8
3,443,741	+				+0.4
3,443,742	-				-2.9
3,443,744	+				-0.5
3,443,744	+				-0.4
3,443,745	-				+0.6
3,443,758	+				+0.9
3,443,766	+				-0.9
3,443,766	+				+0.1
3,443,767	-				-0.5
3,443,801	+				+0.2
3,443,801	+				+0.1
3,443,836	+				+0.1
3,443,864	-				+0.1
3,443,864	-				+0.5
3,443,976	+		Sama_2897	0.16	+0.7
3,444,007	+		Sama_2897	0.18	-0.2
3,444,024	+		Sama_2897	0.19	-1.0
3,444,041	+		Sama_2897	0.20	+2.3
3,444,041	+		Sama_2897	0.20	+1.1
3,444,042	-		Sama_2897	0.20	-0.0
3,444,042	-		Sama_2897	0.20	-0.7
3,444,053	+		Sama_2897	0.20	-0.1
3,444,053	+		Sama_2897	0.20	-0.0
3,444,054	-		Sama_2897	0.20	+0.9
3,444,134	-		Sama_2897	0.26	+0.1
3,444,134	-		Sama_2897	0.26	-1.0
3,444,181	+		Sama_2897	0.28	-0.6
3,444,181	+		Sama_2897	0.28	+0.7
3,444,181	+		Sama_2897	0.28	+0.6
3,444,181	+		Sama_2897	0.28	-1.7
3,444,182	-		Sama_2897	0.29	-0.7
3,444,182	-		Sama_2897	0.29	-1.1
3,444,182	-		Sama_2897	0.29	+0.3
3,444,182	-		Sama_2897	0.29	-1.5
3,444,182	-		Sama_2897	0.29	-0.5
3,444,395	+		Sama_2897	0.42	-1.0
3,444,395	+		Sama_2897	0.42	+1.3
3,444,395	+		Sama_2897	0.42	+1.3
3,444,396	-		Sama_2897	0.42	+2.0
3,444,435	+		Sama_2897	0.44	-3.2
3,444,435	+		Sama_2897	0.44	-2.0
3,444,435	+		Sama_2897	0.44	+0.3
3,444,435	+		Sama_2897	0.44	+0.1
3,444,435	+		Sama_2897	0.44	-0.0
3,444,435	+		Sama_2897	0.44	-0.1
3,444,435	+		Sama_2897	0.44	-1.3
3,444,436	-		Sama_2897	0.44	+0.3
3,444,436	-		Sama_2897	0.44	+0.3
3,444,436	-		Sama_2897	0.44	-1.1
3,444,436	-		Sama_2897	0.44	+1.6
3,444,436	-		Sama_2897	0.44	-0.1
3,444,436	-		Sama_2897	0.44	-3.0
3,444,436	-		Sama_2897	0.44	+0.1
3,444,436	-		Sama_2897	0.44	+0.3
3,444,436	-		Sama_2897	0.44	-1.9
3,444,436	-		Sama_2897	0.44	-0.0
3,444,436	-		Sama_2897	0.44	-0.2
3,444,436	-		Sama_2897	0.44	+1.6
3,444,436	-		Sama_2897	0.44	-0.4
3,444,436	-		Sama_2897	0.44	+0.4
3,444,436	-		Sama_2897	0.44	+0.1
3,444,440	+		Sama_2897	0.45	-0.0
3,444,440	+		Sama_2897	0.45	-1.3
3,444,440	+		Sama_2897	0.45	+0.2
3,444,440	+		Sama_2897	0.45	-0.3
3,444,440	+		Sama_2897	0.45	+0.9
3,444,440	+		Sama_2897	0.45	-1.0
3,444,440	+		Sama_2897	0.45	+2.3
3,444,440	+		Sama_2897	0.45	-0.1
3,444,440	+		Sama_2897	0.45	-0.1
3,444,440	+		Sama_2897	0.45	+0.3
3,444,441	-		Sama_2897	0.45	-0.2
3,444,441	-		Sama_2897	0.45	+0.0
3,444,441	-		Sama_2897	0.45	+0.6
3,444,441	-		Sama_2897	0.45	-0.2
3,444,441	-		Sama_2897	0.45	+0.5
3,444,441	-		Sama_2897	0.45	-0.9
3,444,441	-		Sama_2897	0.45	+0.5
3,444,441	-		Sama_2897	0.45	-2.0
3,444,441	-		Sama_2897	0.45	-0.2
3,444,441	-		Sama_2897	0.45	+1.3
3,444,441	-		Sama_2897	0.45	+0.9
3,444,441	-		Sama_2897	0.45	+0.2
3,444,441	-		Sama_2897	0.45	-0.5
3,444,444	+		Sama_2897	0.45	+2.9
3,444,444	+		Sama_2897	0.45	+1.2
3,444,444	+		Sama_2897	0.45	+1.3
3,444,444	+		Sama_2897	0.45	-0.6
3,444,444	+		Sama_2897	0.45	+0.1
3,444,445	-		Sama_2897	0.45	-1.3
3,444,445	-		Sama_2897	0.45	-0.1
3,444,445	-		Sama_2897	0.45	-0.4
3,444,445	-		Sama_2897	0.45	-0.0
3,444,445	-		Sama_2897	0.45	-1.3
3,444,445	-		Sama_2897	0.45	+1.3
3,444,445	-		Sama_2897	0.45	-1.8
3,444,445	-		Sama_2897	0.45	-1.5
3,444,445	-		Sama_2897	0.45	-0.4
3,444,445	-		Sama_2897	0.45	-0.1
3,444,445	-		Sama_2897	0.45	-0.2
3,444,445	-		Sama_2897	0.45	-0.9
3,444,445	-		Sama_2897	0.45	+0.9
3,444,445	-		Sama_2897	0.45	+0.3
3,444,445	-		Sama_2897	0.45	-1.5
3,444,496	+		Sama_2897	0.48	+1.9
3,444,518	+		Sama_2897	0.50	+0.1
3,444,518	+		Sama_2897	0.50	-0.3
3,444,519	-		Sama_2897	0.50	-0.3
3,444,519	-		Sama_2897	0.50	+0.3
3,444,533	-		Sama_2897	0.51	+0.7
3,444,549	+		Sama_2897	0.52	+1.1
3,444,550	-		Sama_2897	0.52	-2.4
3,444,550	-		Sama_2897	0.52	+0.4
3,444,726	+		Sama_2897	0.63	+0.7
3,444,727	-		Sama_2897	0.63	-1.4
3,444,760	+		Sama_2897	0.65	+0.1
3,444,760	+		Sama_2897	0.65	-0.5
3,444,761	-		Sama_2897	0.65	-1.4
3,444,793	+		Sama_2897	0.67	-0.5
3,444,793	+		Sama_2897	0.67	+0.4
3,444,793	+		Sama_2897	0.67	+0.9
3,444,794	-		Sama_2897	0.67	-1.5
3,444,794	-		Sama_2897	0.67	+0.1
3,444,794	-		Sama_2897	0.67	+1.4
3,444,794	-		Sama_2897	0.67	+2.0
3,444,794	-		Sama_2897	0.67	-0.4
3,444,794	-		Sama_2897	0.67	-0.3
3,444,794	-		Sama_2897	0.67	-0.2
3,444,794	-		Sama_2897	0.67	+0.3
3,444,794	-		Sama_2897	0.67	+1.9
3,444,794	-		Sama_2897	0.67	+0.1
3,444,937	+		Sama_2897	0.76	-0.5
3,444,971	+		Sama_2897	0.78	+0.3
3,444,971	+		Sama_2897	0.78	+1.3
3,444,971	+		Sama_2897	0.78	+0.6
3,444,971	+		Sama_2897	0.78	+0.6
3,444,971	+		Sama_2897	0.78	-0.8
3,445,009	+		Sama_2897	0.80	+1.0
3,445,009	+		Sama_2897	0.80	+0.9
3,445,009	+		Sama_2897	0.80	+0.4
3,445,009	+		Sama_2897	0.80	-0.4
3,445,010	-		Sama_2897	0.80	+1.6
3,445,010	-		Sama_2897	0.80	+0.1
3,445,031	+		Sama_2897	0.82	-1.0
3,445,032	-		Sama_2897	0.82	+0.2
3,445,046	+		Sama_2897	0.83	-1.0
3,445,046	+		Sama_2897	0.83	+0.4
3,445,046	+		Sama_2897	0.83	+0.4
3,445,046	+		Sama_2897	0.83	-0.4
3,445,046	+		Sama_2897	0.83	+0.3
3,445,046	+		Sama_2897	0.83	+0.1
3,445,053	+		Sama_2897	0.83	+0.5
3,445,054	-		Sama_2897	0.83	-0.9
3,445,178	-				-0.7
3,445,236	+				+1.0
3,445,236	+				-1.2
3,445,382	+				+1.0
3,445,383	-				-0.7
3,445,383	-				-0.2
3,445,424	+				+0.9
3,445,425	-				-1.3
3,445,425	-				-0.1
3,445,511	-				-0.6
3,445,547	-				+0.3
3,445,557	+				-0.3
3,445,557	+				-0.3
3,445,558	-				+1.1
3,445,580	+		Sama_2898	0.11	-1.0
3,445,580	+		Sama_2898	0.11	-1.3
3,445,580	+		Sama_2898	0.11	-0.3
3,445,580	+		Sama_2898	0.11	-1.3
3,445,580	+		Sama_2898	0.11	-0.5
3,445,580	+		Sama_2898	0.11	-0.5
3,445,580	+		Sama_2898	0.11	+0.5
3,445,580	+		Sama_2898	0.11	-0.2
3,445,580	+		Sama_2898	0.11	-0.9
3,445,581	-		Sama_2898	0.11	+0.9
3,445,581	-		Sama_2898	0.11	-1.0
3,445,581	-		Sama_2898	0.11	-2.3
3,445,581	-		Sama_2898	0.11	-0.7
3,445,581	-		Sama_2898	0.11	+2.0
3,445,581	-		Sama_2898	0.11	+0.5
3,445,581	-		Sama_2898	0.11	-0.9
3,445,581	-		Sama_2898	0.11	+1.0
3,445,581	-		Sama_2898	0.11	-0.5
3,445,584	+		Sama_2898	0.11	-2.4
3,445,584	+		Sama_2898	0.11	+0.2
3,445,584	+		Sama_2898	0.11	+1.4
3,445,584	+		Sama_2898	0.11	+0.2
3,445,584	+		Sama_2898	0.11	-0.5
3,445,584	+		Sama_2898	0.11	-2.0
3,445,584	+		Sama_2898	0.11	-0.0
3,445,584	+		Sama_2898	0.11	+0.5
3,445,585	-		Sama_2898	0.11	-2.0
3,445,585	-		Sama_2898	0.11	+0.1
3,445,585	-		Sama_2898	0.11	-1.0
3,445,585	-		Sama_2898	0.11	-0.7
3,445,585	-		Sama_2898	0.11	-0.2
3,445,585	-		Sama_2898	0.11	+0.9
3,445,585	-		Sama_2898	0.11	-0.6
3,445,585	-		Sama_2898	0.11	+0.1
3,445,585	-		Sama_2898	0.11	-0.5
3,445,585	-		Sama_2898	0.11	+1.0
3,445,585	-		Sama_2898	0.11	-0.1
3,445,585	-		Sama_2898	0.11	+0.4
3,445,585	-		Sama_2898	0.11	+0.1
3,445,585	-		Sama_2898	0.11	+0.3
3,445,637	-		Sama_2898	0.15	-1.3
3,445,637	-		Sama_2898	0.15	+0.3
3,445,637	-		Sama_2898	0.15	+1.0
3,445,637	-		Sama_2898	0.15	+1.0
3,445,670	-		Sama_2898	0.18	+0.4
3,445,752	+		Sama_2898	0.24	+0.1
3,445,757	-		Sama_2898	0.24	+0.0
3,445,757	-		Sama_2898	0.24	-0.1
3,445,767	-		Sama_2898	0.25	+0.6
3,445,767	-		Sama_2898	0.25	-0.9
3,445,816	+		Sama_2898	0.29	+0.3
3,445,816	+		Sama_2898	0.29	+1.7
3,445,817	-		Sama_2898	0.29	-0.2
3,445,914	+		Sama_2898	0.37	+2.6
3,445,915	-		Sama_2898	0.37	-0.5
3,445,982	-		Sama_2898	0.42	+1.1
3,446,035	+		Sama_2898	0.46	-2.8
3,446,035	+		Sama_2898	0.46	+2.0
3,446,036	-		Sama_2898	0.46	+0.0
3,446,036	-		Sama_2898	0.46	+0.7
3,446,090	-		Sama_2898	0.50	-0.2
3,446,090	-		Sama_2898	0.50	-0.1
3,446,108	+		Sama_2898	0.52	-0.0
3,446,108	+		Sama_2898	0.52	-0.9
3,446,109	-		Sama_2898	0.52	+0.7
3,446,109	-		Sama_2898	0.52	+0.7
3,446,109	-		Sama_2898	0.52	-0.0
3,446,143	+		Sama_2898	0.54	-1.0
3,446,269	+		Sama_2898	0.64	+0.2
3,446,269	+		Sama_2898	0.64	-0.7
3,446,281	+		Sama_2898	0.65	+0.1
3,446,282	-		Sama_2898	0.65	-0.5
3,446,291	+		Sama_2898	0.66	+0.9
3,446,291	+		Sama_2898	0.66	-0.2
3,446,292	-		Sama_2898	0.66	+0.6
3,446,292	-		Sama_2898	0.66	-0.5
3,446,292	-		Sama_2898	0.66	-0.8
3,446,292	-		Sama_2898	0.66	-0.0
3,446,296	+		Sama_2898	0.66	+1.3
3,446,296	+		Sama_2898	0.66	+0.5
3,446,296	+		Sama_2898	0.66	+0.3