Strain Fitness in Shewanella oneidensis MR-1 around SO2070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,165,421	-	hisF	SO2068	0.79	+0.9
2,165,528	+				-0.4
2,165,529	-				-0.2
2,165,561	-				+0.4
2,165,583	+				-0.1
2,165,602	+				+0.3
2,165,660	+	hisA	SO2069	0.12	-1.1
2,165,695	-	hisA	SO2069	0.17	+0.2
2,165,746	-	hisA	SO2069	0.24	+0.0
2,165,799	-	hisA	SO2069	0.31	+0.1
2,165,924	+	hisA	SO2069	0.48	-0.1
2,166,092	+	hisA	SO2069	0.71	-0.0
2,166,092	+	hisA	SO2069	0.71	+1.9
2,166,100	-	hisA	SO2069	0.72	+0.2
2,166,100	-	hisA	SO2069	0.72	+0.3
2,166,216	+	hisA	SO2069	0.88	-0.0
2,166,241	+				+0.5
2,166,311	-				+2.0
2,166,483	+	hisH	SO2070	0.11	+0.3
2,166,483	+	hisH	SO2070	0.11	-0.2
2,166,510	+	hisH	SO2070	0.15	+0.4
2,166,552	-	hisH	SO2070	0.21	-0.6
2,166,575	-	hisH	SO2070	0.25	-0.2
2,166,656	+	hisH	SO2070	0.37	-0.2
2,166,792	+	hisH	SO2070	0.57	-0.8
2,166,942	+	hisH	SO2070	0.80	+0.1
2,166,943	+	hisH	SO2070	0.80	-0.3
2,167,012	+				-0.3
2,167,130	-				+0.8
2,167,185	+				-0.1
2,167,193	-				+1.2
2,167,193	-				+1.0
2,167,225	-				+0.3
2,167,294	-				-0.6
2,167,305	+				+0.7
2,167,358	+	hisB	SO2071	0.13	+0.1
2,167,488	+	hisB	SO2071	0.25	+0.4
2,167,596	-	hisB	SO2071	0.34	-0.5
2,167,637	-	hisB	SO2071	0.38	-0.2
2,167,877	-	hisB	SO2071	0.60	+0.5
2,167,918	+	hisB	SO2071	0.64	-0.3