Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2461 and Dsui_2462 are separated by 30 nucleotides Dsui_2462 and Dsui_2463 are separated by 67 nucleotides Dsui_2463 and Dsui_2464 are separated by 158 nucleotides Dsui_2464 and Dsui_2465 overlap by 4 nucleotides
Dsui_2461: Dsui_2461 - GTP-binding protein Era, at 2,618,720 to 2,619,613
_2461
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Dsui_2464: Dsui_2464 - holo-(acyl-carrier-protein) synthase, at 2,621,336 to 2,621,725
_2464
Dsui_2465: Dsui_2465 - beta-glucosidase-like glycosyl hydrolase, at 2,621,722 to 2,622,747
_2465
Position (kb)
2620
2621
2622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2619.597 kb on + strand at 2619.634 kb on + strand at 2619.659 kb on + strand at 2619.683 kb on + strand at 2619.747 kb on + strand, within Dsui_2462 at 2619.747 kb on + strand, within Dsui_2462 at 2619.760 kb on + strand, within Dsui_2462 at 2619.818 kb on + strand, within Dsui_2462 at 2619.829 kb on + strand, within Dsui_2462 at 2619.862 kb on + strand, within Dsui_2462 at 2619.949 kb on - strand, within Dsui_2462 at 2619.987 kb on - strand, within Dsui_2462 at 2619.995 kb on + strand, within Dsui_2462 at 2620.037 kb on + strand, within Dsui_2462 at 2620.091 kb on - strand, within Dsui_2462 at 2620.116 kb on - strand, within Dsui_2462 at 2620.145 kb on - strand at 2620.248 kb on + strand, within Dsui_2462 at 2620.323 kb on - strand at 2621.187 kb on - strand at 2621.188 kb on + strand at 2621.211 kb on + strand at 2621.211 kb on + strand at 2621.246 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.258 kb on + strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.266 kb on - strand at 2621.267 kb on + strand at 2621.316 kb on - strand at 2621.778 kb on + strand at 2621.803 kb on + strand at 2621.811 kb on - strand at 2621.828 kb on + strand, within Dsui_2465 at 2621.868 kb on + strand, within Dsui_2465 at 2621.897 kb on - strand, within Dsui_2465 at 2621.897 kb on - strand at 2621.897 kb on - strand, within Dsui_2465 at 2622.046 kb on + strand, within Dsui_2465 at 2622.053 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,619,597 + +0.3 2,619,634 + -0.0 2,619,659 + +0.7 2,619,683 + +0.3 2,619,747 + Dsui_2462 0.14 +0.2 2,619,747 + Dsui_2462 0.14 -3.4 2,619,760 + Dsui_2462 0.16 -0.2 2,619,818 + Dsui_2462 0.24 -1.0 2,619,829 + Dsui_2462 0.26 -0.2 2,619,862 + Dsui_2462 0.31 -0.0 2,619,949 - Dsui_2462 0.43 +0.3 2,619,987 - Dsui_2462 0.48 +0.6 2,619,995 + Dsui_2462 0.49 +0.3 2,620,037 + Dsui_2462 0.55 -0.5 2,620,091 - Dsui_2462 0.63 +0.5 2,620,116 - Dsui_2462 0.66 -1.6 2,620,145 - +0.8 2,620,248 + Dsui_2462 0.85 -0.2 2,620,323 - +0.6 2,621,187 - +2.8 2,621,188 + +1.3 2,621,211 + -0.0 2,621,211 + -0.3 2,621,246 + -0.6 2,621,258 + +0.0 2,621,258 + +0.1 2,621,258 + +0.3 2,621,258 + -0.9 2,621,258 + -0.0 2,621,266 - -0.2 2,621,266 - -1.1 2,621,266 - +0.8 2,621,267 + -0.3 2,621,316 - -0.5 2,621,778 + +0.9 2,621,803 + +1.1 2,621,811 - -0.3 2,621,828 + Dsui_2465 0.10 +0.8 2,621,868 + Dsui_2465 0.14 +0.8 2,621,897 - Dsui_2465 0.17 +0.2 2,621,897 - +2.5 2,621,897 - Dsui_2465 0.17 +0.1 2,622,046 + Dsui_2465 0.32 +1.6 2,622,053 - +0.5
Or see this region's nucleotide sequence