Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1749 and Dsui_1750 are separated by 13 nucleotides Dsui_1750 and Dsui_1751 are separated by 64 nucleotides
Dsui_1749: Dsui_1749 - flagellar motor switch protein FliM, at 1,835,886 to 1,836,890
_1749
Dsui_1750: Dsui_1750 - flagellar basal body-associated protein, at 1,836,904 to 1,837,434
_1750
Dsui_1751: Dsui_1751 - flagellar hook-length control protein, at 1,837,499 to 1,838,620
_1751
Position (kb)
1836
1837
1838 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1835.911 kb on + strand at 1835.911 kb on + strand at 1835.939 kb on + strand at 1836.023 kb on - strand, within Dsui_1749 at 1836.071 kb on - strand, within Dsui_1749 at 1836.091 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.196 kb on + strand, within Dsui_1749 at 1836.201 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.204 kb on - strand, within Dsui_1749 at 1836.232 kb on - strand, within Dsui_1749 at 1836.296 kb on - strand, within Dsui_1749 at 1836.428 kb on + strand, within Dsui_1749 at 1836.535 kb on - strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.543 kb on + strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.556 kb on - strand, within Dsui_1749 at 1836.565 kb on + strand, within Dsui_1749 at 1836.589 kb on - strand, within Dsui_1749 at 1836.643 kb on - strand, within Dsui_1749 at 1836.679 kb on - strand, within Dsui_1749 at 1836.689 kb on - strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.725 kb on + strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.733 kb on - strand, within Dsui_1749 at 1836.766 kb on + strand, within Dsui_1749 at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.841 kb on + strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.849 kb on - strand at 1836.879 kb on + strand at 1836.950 kb on + strand at 1836.957 kb on - strand, within Dsui_1750 at 1837.086 kb on + strand, within Dsui_1750 at 1837.132 kb on - strand, within Dsui_1750 at 1837.142 kb on - strand, within Dsui_1750 at 1837.177 kb on - strand, within Dsui_1750 at 1837.318 kb on - strand, within Dsui_1750 at 1837.432 kb on - strand at 1837.441 kb on - strand at 1837.444 kb on - strand at 1837.451 kb on - strand at 1837.496 kb on + strand at 1837.501 kb on + strand at 1837.513 kb on + strand at 1837.516 kb on - strand at 1837.517 kb on - strand at 1837.517 kb on - strand at 1837.591 kb on - strand at 1837.596 kb on - strand at 1837.630 kb on - strand, within Dsui_1751 at 1837.640 kb on - strand, within Dsui_1751 at 1837.681 kb on + strand at 1837.706 kb on - strand, within Dsui_1751 at 1837.718 kb on - strand, within Dsui_1751 at 1837.762 kb on + strand, within Dsui_1751 at 1837.765 kb on - strand, within Dsui_1751 at 1837.775 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.787 kb on - strand, within Dsui_1751 at 1837.820 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.829 kb on - strand, within Dsui_1751 at 1837.845 kb on - strand, within Dsui_1751 at 1837.927 kb on - strand, within Dsui_1751 at 1837.976 kb on + strand, within Dsui_1751 at 1838.061 kb on - strand, within Dsui_1751 at 1838.065 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.132 kb on + strand, within Dsui_1751 at 1838.167 kb on + strand, within Dsui_1751 at 1838.321 kb on + strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751 at 1838.322 kb on - strand, within Dsui_1751
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,835,911 + -0.2 1,835,911 + -1.0 1,835,939 + -0.6 1,836,023 - Dsui_1749 0.14 -0.6 1,836,071 - Dsui_1749 0.18 +0.6 1,836,091 + Dsui_1749 0.20 -1.5 1,836,196 + Dsui_1749 0.31 -0.6 1,836,196 + Dsui_1749 0.31 -0.8 1,836,201 - Dsui_1749 0.31 -0.3 1,836,204 - Dsui_1749 0.32 -0.2 1,836,204 - Dsui_1749 0.32 -1.3 1,836,232 - Dsui_1749 0.34 -0.8 1,836,296 - Dsui_1749 0.41 -0.7 1,836,428 + Dsui_1749 0.54 +0.2 1,836,535 - Dsui_1749 0.65 -0.8 1,836,543 + Dsui_1749 0.65 -0.9 1,836,543 + Dsui_1749 0.65 +0.5 1,836,543 + Dsui_1749 0.65 -0.8 1,836,556 - Dsui_1749 0.67 -0.2 1,836,556 - Dsui_1749 0.67 -1.7 1,836,565 + Dsui_1749 0.68 -1.7 1,836,589 - Dsui_1749 0.70 -0.8 1,836,643 - Dsui_1749 0.75 +0.5 1,836,679 - Dsui_1749 0.79 -0.9 1,836,689 - Dsui_1749 0.80 -0.9 1,836,725 + Dsui_1749 0.83 -1.7 1,836,725 + Dsui_1749 0.83 -1.1 1,836,733 - Dsui_1749 0.84 -0.9 1,836,733 - Dsui_1749 0.84 -0.6 1,836,733 - Dsui_1749 0.84 -0.9 1,836,733 - Dsui_1749 0.84 +0.5 1,836,733 - Dsui_1749 0.84 -0.6 1,836,733 - Dsui_1749 0.84 -1.2 1,836,733 - Dsui_1749 0.84 -1.4 1,836,766 + Dsui_1749 0.88 -0.4 1,836,841 + -1.4 1,836,841 + -1.0 1,836,841 + +0.2 1,836,849 - -0.5 1,836,849 - -0.8 1,836,849 - +0.4 1,836,849 - -1.3 1,836,849 - -0.0 1,836,849 - -0.3 1,836,849 - +0.3 1,836,879 + -1.4 1,836,950 + -1.2 1,836,957 - Dsui_1750 0.10 -0.9 1,837,086 + Dsui_1750 0.34 -0.7 1,837,132 - Dsui_1750 0.43 -0.6 1,837,142 - Dsui_1750 0.45 +0.2 1,837,177 - Dsui_1750 0.51 -0.1 1,837,318 - Dsui_1750 0.78 +0.7 1,837,432 - -0.1 1,837,441 - +0.0 1,837,444 - +0.2 1,837,451 - -1.0 1,837,496 + -0.6 1,837,501 + -1.3 1,837,513 + +0.2 1,837,516 - -0.4 1,837,517 - +0.4 1,837,517 - -0.8 1,837,591 - -0.6 1,837,596 - -1.0 1,837,630 - Dsui_1751 0.12 -0.1 1,837,640 - Dsui_1751 0.13 -1.1 1,837,681 + +1.8 1,837,706 - Dsui_1751 0.18 -0.7 1,837,718 - Dsui_1751 0.20 -1.3 1,837,762 + Dsui_1751 0.23 -0.9 1,837,765 - Dsui_1751 0.24 -0.2 1,837,775 - Dsui_1751 0.25 -0.1 1,837,787 - Dsui_1751 0.26 +0.7 1,837,787 - Dsui_1751 0.26 -0.2 1,837,820 - Dsui_1751 0.29 -2.4 1,837,829 - Dsui_1751 0.29 -1.9 1,837,829 - Dsui_1751 0.29 -0.7 1,837,845 - Dsui_1751 0.31 -1.8 1,837,927 - Dsui_1751 0.38 -0.4 1,837,976 + Dsui_1751 0.43 -1.6 1,838,061 - Dsui_1751 0.50 -1.9 1,838,065 + Dsui_1751 0.50 -1.8 1,838,132 + Dsui_1751 0.56 -0.7 1,838,132 + Dsui_1751 0.56 -2.3 1,838,167 + Dsui_1751 0.60 -0.8 1,838,321 + Dsui_1751 0.73 -0.8 1,838,322 - Dsui_1751 0.73 -2.9 1,838,322 - Dsui_1751 0.73 -0.5 1,838,322 - Dsui_1751 0.73 -0.7
Or see this region's nucleotide sequence