Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1335 and Dsui_1336 are separated by 586 nucleotides Dsui_1336 and Dsui_1337 are separated by 237 nucleotides Dsui_1337 and Dsui_1338 are separated by 14 nucleotides Dsui_1338 and Dsui_1339 are separated by 228 nucleotides
Dsui_1335: Dsui_1335 - metalloendopeptidase-like membrane protein, at 1,391,615 to 1,392,967
_1335
Dsui_1336: Dsui_1336 - 16S ribosomal RNA, at 1,393,554 to 1,394,975
_1336
Dsui_1337: Dsui_1337 - tRNA-Ile, at 1,395,213 to 1,395,289
_1337
Dsui_1338: Dsui_1338 - tRNA-Ala, at 1,395,304 to 1,395,379
_1338
Dsui_1339: Dsui_1339 - 23S ribosomal RNA, at 1,395,608 to 1,398,489
_1339
Position (kb)
1393
1394
1395 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1392.558 kb on - strand, within Dsui_1335 at 1392.558 kb on - strand, within Dsui_1335 at 1392.566 kb on - strand, within Dsui_1335 at 1392.574 kb on - strand, within Dsui_1335 at 1392.575 kb on - strand, within Dsui_1335 at 1392.580 kb on - strand, within Dsui_1335 at 1392.587 kb on + strand, within Dsui_1335 at 1392.606 kb on + strand, within Dsui_1335 at 1392.619 kb on + strand, within Dsui_1335 at 1392.627 kb on - strand, within Dsui_1335 at 1392.627 kb on - strand, within Dsui_1335 at 1392.636 kb on + strand, within Dsui_1335 at 1392.639 kb on - strand, within Dsui_1335 at 1392.641 kb on + strand, within Dsui_1335 at 1392.644 kb on - strand, within Dsui_1335 at 1392.644 kb on - strand, within Dsui_1335 at 1392.646 kb on + strand, within Dsui_1335 at 1392.649 kb on - strand, within Dsui_1335 at 1392.654 kb on + strand, within Dsui_1335 at 1392.666 kb on - strand, within Dsui_1335 at 1392.672 kb on + strand, within Dsui_1335 at 1392.672 kb on + strand, within Dsui_1335 at 1392.680 kb on - strand, within Dsui_1335 at 1392.682 kb on + strand, within Dsui_1335 at 1392.686 kb on + strand, within Dsui_1335 at 1392.692 kb on + strand, within Dsui_1335 at 1392.692 kb on + strand, within Dsui_1335 at 1392.694 kb on - strand, within Dsui_1335 at 1392.700 kb on - strand, within Dsui_1335 at 1392.701 kb on + strand, within Dsui_1335 at 1392.701 kb on + strand, within Dsui_1335 at 1392.710 kb on - strand, within Dsui_1335 at 1392.737 kb on + strand, within Dsui_1335 at 1392.742 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.750 kb on + strand, within Dsui_1335 at 1392.751 kb on + strand, within Dsui_1335 at 1392.752 kb on - strand, within Dsui_1335 at 1392.752 kb on - strand, within Dsui_1335 at 1392.752 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.758 kb on - strand, within Dsui_1335 at 1392.760 kb on - strand, within Dsui_1335 at 1392.763 kb on - strand, within Dsui_1335 at 1392.766 kb on + strand, within Dsui_1335 at 1392.768 kb on - strand, within Dsui_1335 at 1392.768 kb on - strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.773 kb on + strand, within Dsui_1335 at 1392.774 kb on - strand, within Dsui_1335 at 1392.774 kb on - strand, within Dsui_1335 at 1392.781 kb on - strand, within Dsui_1335 at 1392.781 kb on - strand, within Dsui_1335 at 1392.781 kb on - strand, within Dsui_1335 at 1392.786 kb on + strand, within Dsui_1335 at 1392.788 kb on - strand, within Dsui_1335 at 1392.792 kb on + strand, within Dsui_1335 at 1392.799 kb on + strand, within Dsui_1335 at 1392.799 kb on + strand, within Dsui_1335 at 1392.799 kb on + strand, within Dsui_1335 at 1392.799 kb on + strand, within Dsui_1335 at 1392.799 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.807 kb on - strand, within Dsui_1335 at 1392.822 kb on - strand, within Dsui_1335 at 1392.844 kb on + strand at 1392.846 kb on + strand at 1392.846 kb on + strand at 1392.846 kb on + strand at 1392.851 kb on + strand at 1392.851 kb on + strand at 1392.854 kb on - strand at 1392.856 kb on + strand at 1392.856 kb on + strand at 1392.857 kb on + strand at 1392.857 kb on + strand at 1392.857 kb on + strand at 1392.857 kb on + strand at 1392.857 kb on + strand at 1392.859 kb on - strand at 1392.864 kb on + strand at 1392.864 kb on - strand at 1392.865 kb on - strand at 1392.865 kb on - strand at 1392.925 kb on + strand at 1392.933 kb on + strand at 1392.934 kb on - strand at 1392.939 kb on - strand at 1392.939 kb on - strand at 1392.941 kb on - strand at 1392.946 kb on - strand at 1392.948 kb on - strand at 1392.949 kb on - strand at 1392.956 kb on + strand at 1392.958 kb on - strand at 1392.969 kb on - strand at 1392.969 kb on - strand at 1392.970 kb on + strand at 1392.971 kb on - strand at 1392.973 kb on - strand at 1392.978 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.983 kb on - strand at 1392.988 kb on + strand at 1392.997 kb on + strand at 1393.002 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.003 kb on + strand at 1393.006 kb on - strand at 1393.011 kb on - strand at 1393.011 kb on - strand at 1393.011 kb on - strand at 1393.011 kb on - strand at 1393.011 kb on - strand at 1393.011 kb on - strand at 1393.013 kb on - strand at 1393.020 kb on + strand at 1393.020 kb on + strand at 1393.028 kb on - strand at 1393.031 kb on - strand at 1393.035 kb on - strand at 1393.037 kb on + strand at 1393.039 kb on - strand at 1393.045 kb on + strand at 1393.045 kb on + strand at 1393.053 kb on - strand at 1393.057 kb on + strand at 1393.065 kb on + strand at 1393.067 kb on + strand at 1393.077 kb on + strand at 1393.077 kb on + strand at 1393.078 kb on - strand at 1393.085 kb on - strand at 1393.085 kb on - strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.087 kb on + strand at 1393.094 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.095 kb on - strand at 1393.098 kb on + strand at 1393.106 kb on - strand at 1393.119 kb on + strand at 1393.136 kb on + strand at 1393.136 kb on + strand at 1393.149 kb on - strand at 1393.179 kb on - strand at 1393.183 kb on - strand at 1393.185 kb on + strand at 1393.185 kb on + strand at 1393.185 kb on + strand at 1393.188 kb on - strand at 1393.206 kb on + strand at 1393.206 kb on + strand at 1393.206 kb on + strand at 1393.206 kb on + strand at 1393.206 kb on + strand at 1393.264 kb on + strand at 1393.315 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,392,558 - Dsui_1335 0.70 +0.4 1,392,558 - Dsui_1335 0.70 +0.9 1,392,566 - Dsui_1335 0.70 +0.9 1,392,574 - Dsui_1335 0.71 +0.8 1,392,575 - Dsui_1335 0.71 +0.2 1,392,580 - Dsui_1335 0.71 +0.4 1,392,587 + Dsui_1335 0.72 -0.6 1,392,606 + Dsui_1335 0.73 +0.1 1,392,619 + Dsui_1335 0.74 +0.8 1,392,627 - Dsui_1335 0.75 +0.8 1,392,627 - Dsui_1335 0.75 +0.1 1,392,636 + Dsui_1335 0.75 +0.2 1,392,639 - Dsui_1335 0.76 +0.6 1,392,641 + Dsui_1335 0.76 +0.0 1,392,644 - Dsui_1335 0.76 +0.8 1,392,644 - Dsui_1335 0.76 +0.1 1,392,646 + Dsui_1335 0.76 +0.8 1,392,649 - Dsui_1335 0.76 +0.9 1,392,654 + Dsui_1335 0.77 +0.7 1,392,666 - Dsui_1335 0.78 +0.4 1,392,672 + Dsui_1335 0.78 -0.3 1,392,672 + Dsui_1335 0.78 +1.0 1,392,680 - Dsui_1335 0.79 +0.6 1,392,682 + Dsui_1335 0.79 +0.4 1,392,686 + Dsui_1335 0.79 +0.3 1,392,692 + Dsui_1335 0.80 +0.8 1,392,692 + Dsui_1335 0.80 +0.6 1,392,694 - Dsui_1335 0.80 +0.6 1,392,700 - Dsui_1335 0.80 +0.5 1,392,701 + Dsui_1335 0.80 +0.5 1,392,701 + Dsui_1335 0.80 +0.6 1,392,710 - Dsui_1335 0.81 +0.2 1,392,737 + Dsui_1335 0.83 +0.5 1,392,742 + Dsui_1335 0.83 +0.1 1,392,750 + Dsui_1335 0.84 +0.4 1,392,750 + Dsui_1335 0.84 +0.4 1,392,750 + Dsui_1335 0.84 +1.0 1,392,750 + Dsui_1335 0.84 +1.5 1,392,750 + Dsui_1335 0.84 +0.7 1,392,750 + Dsui_1335 0.84 -1.2 1,392,751 + Dsui_1335 0.84 +0.1 1,392,752 - Dsui_1335 0.84 +0.1 1,392,752 - Dsui_1335 0.84 +0.9 1,392,752 - Dsui_1335 0.84 +1.0 1,392,758 - Dsui_1335 0.84 +0.1 1,392,758 - Dsui_1335 0.84 +0.2 1,392,758 - Dsui_1335 0.84 +0.2 1,392,758 - Dsui_1335 0.84 +0.5 1,392,758 - Dsui_1335 0.84 +0.7 1,392,758 - Dsui_1335 0.84 +0.5 1,392,758 - Dsui_1335 0.84 +0.8 1,392,760 - Dsui_1335 0.85 -0.0 1,392,763 - Dsui_1335 0.85 +0.9 1,392,766 + Dsui_1335 0.85 +0.6 1,392,768 - Dsui_1335 0.85 +0.0 1,392,768 - Dsui_1335 0.85 +1.0 1,392,773 + Dsui_1335 0.86 +1.2 1,392,773 + Dsui_1335 0.86 +1.4 1,392,773 + Dsui_1335 0.86 +0.5 1,392,773 + Dsui_1335 0.86 +0.4 1,392,773 + Dsui_1335 0.86 +0.5 1,392,773 + Dsui_1335 0.86 +0.8 1,392,774 - Dsui_1335 0.86 -0.2 1,392,774 - Dsui_1335 0.86 +0.6 1,392,781 - Dsui_1335 0.86 +0.7 1,392,781 - Dsui_1335 0.86 +0.6 1,392,781 - Dsui_1335 0.86 +0.6 1,392,786 + Dsui_1335 0.87 +0.3 1,392,788 - Dsui_1335 0.87 +0.5 1,392,792 + Dsui_1335 0.87 +1.0 1,392,799 + Dsui_1335 0.88 -0.5 1,392,799 + Dsui_1335 0.88 +0.7 1,392,799 + Dsui_1335 0.88 +0.8 1,392,799 + Dsui_1335 0.88 +0.4 1,392,799 - Dsui_1335 0.88 +0.2 1,392,807 - Dsui_1335 0.88 +0.8 1,392,807 - Dsui_1335 0.88 +0.6 1,392,807 - Dsui_1335 0.88 +0.7 1,392,807 - Dsui_1335 0.88 +0.5 1,392,807 - Dsui_1335 0.88 +0.5 1,392,807 - Dsui_1335 0.88 +0.5 1,392,807 - Dsui_1335 0.88 +0.8 1,392,822 - Dsui_1335 0.89 +0.6 1,392,844 + +0.7 1,392,846 + +0.7 1,392,846 + +0.0 1,392,846 + +0.5 1,392,851 + +0.3 1,392,851 + +0.3 1,392,854 - -0.1 1,392,856 + -0.8 1,392,856 + +0.8 1,392,857 + +0.1 1,392,857 + +0.3 1,392,857 + +0.7 1,392,857 + -2.0 1,392,857 + -0.6 1,392,859 - -0.2 1,392,864 + -2.3 1,392,864 - +0.6 1,392,865 - +0.7 1,392,865 - +1.2 1,392,925 + +1.0 1,392,933 + -0.0 1,392,934 - +0.5 1,392,939 - +1.1 1,392,939 - +0.1 1,392,941 - +0.4 1,392,946 - +0.4 1,392,948 - -0.8 1,392,949 - +1.1 1,392,956 + +0.5 1,392,958 - +0.5 1,392,969 - +0.4 1,392,969 - +0.5 1,392,970 + +0.3 1,392,971 - +0.4 1,392,973 - +0.6 1,392,978 - -0.7 1,392,983 - +0.4 1,392,983 - +0.1 1,392,983 - +0.2 1,392,983 - +0.7 1,392,983 - +0.2 1,392,983 - +0.3 1,392,983 - +0.1 1,392,983 - +0.7 1,392,988 + +1.1 1,392,997 + +0.6 1,393,002 + +0.3 1,393,003 + -0.3 1,393,003 + +0.7 1,393,003 + -0.8 1,393,003 + -0.2 1,393,003 + +0.2 1,393,003 + -0.2 1,393,003 + +0.3 1,393,003 + -0.1 1,393,003 + +0.4 1,393,003 + -0.1 1,393,006 - +0.7 1,393,011 - +1.0 1,393,011 - -0.3 1,393,011 - -0.4 1,393,011 - +0.6 1,393,011 - +0.1 1,393,011 - -1.0 1,393,013 - -2.0 1,393,020 + -0.4 1,393,020 + -0.0 1,393,028 - -2.4 1,393,031 - -0.6 1,393,035 - +0.3 1,393,037 + -0.6 1,393,039 - -0.5 1,393,045 + -0.4 1,393,045 + +0.5 1,393,053 - -1.7 1,393,057 + +0.4 1,393,065 + -0.3 1,393,067 + -0.2 1,393,077 + -0.1 1,393,077 + -0.2 1,393,078 - +0.4 1,393,085 - -2.2 1,393,085 - +0.0 1,393,087 + +0.2 1,393,087 + +0.4 1,393,087 + +0.1 1,393,087 + -0.5 1,393,087 + -0.2 1,393,087 + -0.4 1,393,087 + -0.5 1,393,087 + -0.3 1,393,094 - -0.2 1,393,095 - -0.7 1,393,095 - -1.1 1,393,095 - -1.5 1,393,095 - -1.1 1,393,095 - +0.4 1,393,095 - -1.6 1,393,095 - -1.7 1,393,098 + -0.4 1,393,106 - -1.3 1,393,119 + -0.7 1,393,136 + -0.5 1,393,136 + +0.1 1,393,149 - -2.8 1,393,179 - -1.3 1,393,183 - +1.2 1,393,185 + -0.9 1,393,185 + +0.1 1,393,185 + -0.7 1,393,188 - -1.0 1,393,206 + +0.1 1,393,206 + -0.6 1,393,206 + +0.1 1,393,206 + +0.0 1,393,206 + +0.0 1,393,264 + -0.1 1,393,315 + -0.4
Or see this region's nucleotide sequence