Strain Fitness in Dechlorosoma suillum PS around Dsui_1336

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1335 and Dsui_1336 are separated by 586 nucleotidesDsui_1336 and Dsui_1337 are separated by 237 nucleotidesDsui_1337 and Dsui_1338 are separated by 14 nucleotidesDsui_1338 and Dsui_1339 are separated by 228 nucleotides Dsui_1335: Dsui_1335 - metalloendopeptidase-like membrane protein, at 1,391,615 to 1,392,967 _1335 Dsui_1336: Dsui_1336 - 16S ribosomal RNA, at 1,393,554 to 1,394,975 _1336 Dsui_1337: Dsui_1337 - tRNA-Ile, at 1,395,213 to 1,395,289 _1337 Dsui_1338: Dsui_1338 - tRNA-Ala, at 1,395,304 to 1,395,379 _1338 Dsui_1339: Dsui_1339 - 23S ribosomal RNA, at 1,395,608 to 1,398,489 _1339 Position (kb) 1393 1394 1395Strain fitness (log2 ratio) -3 -2 -1 0 1at 1392.558 kb on - strand, within Dsui_1335at 1392.558 kb on - strand, within Dsui_1335at 1392.566 kb on - strand, within Dsui_1335at 1392.574 kb on - strand, within Dsui_1335at 1392.575 kb on - strand, within Dsui_1335at 1392.580 kb on - strand, within Dsui_1335at 1392.587 kb on + strand, within Dsui_1335at 1392.606 kb on + strand, within Dsui_1335at 1392.619 kb on + strand, within Dsui_1335at 1392.627 kb on - strand, within Dsui_1335at 1392.627 kb on - strand, within Dsui_1335at 1392.636 kb on + strand, within Dsui_1335at 1392.639 kb on - strand, within Dsui_1335at 1392.641 kb on + strand, within Dsui_1335at 1392.644 kb on - strand, within Dsui_1335at 1392.644 kb on - strand, within Dsui_1335at 1392.646 kb on + strand, within Dsui_1335at 1392.649 kb on - strand, within Dsui_1335at 1392.654 kb on + strand, within Dsui_1335at 1392.666 kb on - strand, within Dsui_1335at 1392.672 kb on + strand, within Dsui_1335at 1392.672 kb on + strand, within Dsui_1335at 1392.680 kb on - strand, within Dsui_1335at 1392.682 kb on + strand, within Dsui_1335at 1392.686 kb on + strand, within Dsui_1335at 1392.692 kb on + strand, within Dsui_1335at 1392.692 kb on + strand, within Dsui_1335at 1392.694 kb on - strand, within Dsui_1335at 1392.700 kb on - strand, within Dsui_1335at 1392.701 kb on + strand, within Dsui_1335at 1392.701 kb on + strand, within Dsui_1335at 1392.710 kb on - strand, within Dsui_1335at 1392.737 kb on + strand, within Dsui_1335at 1392.742 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.750 kb on + strand, within Dsui_1335at 1392.751 kb on + strand, within Dsui_1335at 1392.752 kb on - strand, within Dsui_1335at 1392.752 kb on - strand, within Dsui_1335at 1392.752 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.758 kb on - strand, within Dsui_1335at 1392.760 kb on - strand, within Dsui_1335at 1392.763 kb on - strand, within Dsui_1335at 1392.766 kb on + strand, within Dsui_1335at 1392.768 kb on - strand, within Dsui_1335at 1392.768 kb on - strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.773 kb on + strand, within Dsui_1335at 1392.774 kb on - strand, within Dsui_1335at 1392.774 kb on - strand, within Dsui_1335at 1392.781 kb on - strand, within Dsui_1335at 1392.781 kb on - strand, within Dsui_1335at 1392.781 kb on - strand, within Dsui_1335at 1392.786 kb on + strand, within Dsui_1335at 1392.788 kb on - strand, within Dsui_1335at 1392.792 kb on + strand, within Dsui_1335at 1392.799 kb on + strand, within Dsui_1335at 1392.799 kb on + strand, within Dsui_1335at 1392.799 kb on + strand, within Dsui_1335at 1392.799 kb on + strand, within Dsui_1335at 1392.799 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.807 kb on - strand, within Dsui_1335at 1392.822 kb on - strand, within Dsui_1335at 1392.844 kb on + strandat 1392.846 kb on + strandat 1392.846 kb on + strandat 1392.846 kb on + strandat 1392.851 kb on + strandat 1392.851 kb on + strandat 1392.854 kb on - strandat 1392.856 kb on + strandat 1392.856 kb on + strandat 1392.857 kb on + strandat 1392.857 kb on + strandat 1392.857 kb on + strandat 1392.857 kb on + strandat 1392.857 kb on + strandat 1392.859 kb on - strandat 1392.864 kb on + strandat 1392.864 kb on - strandat 1392.865 kb on - strandat 1392.865 kb on - strandat 1392.925 kb on + strandat 1392.933 kb on + strandat 1392.934 kb on - strandat 1392.939 kb on - strandat 1392.939 kb on - strandat 1392.941 kb on - strandat 1392.946 kb on - strandat 1392.948 kb on - strandat 1392.949 kb on - strandat 1392.956 kb on + strandat 1392.958 kb on - strandat 1392.969 kb on - strandat 1392.969 kb on - strandat 1392.970 kb on + strandat 1392.971 kb on - strandat 1392.973 kb on - strandat 1392.978 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.983 kb on - strandat 1392.988 kb on + strandat 1392.997 kb on + strandat 1393.002 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.003 kb on + strandat 1393.006 kb on - strandat 1393.011 kb on - strandat 1393.011 kb on - strandat 1393.011 kb on - strandat 1393.011 kb on - strandat 1393.011 kb on - strandat 1393.011 kb on - strandat 1393.013 kb on - strandat 1393.020 kb on + strandat 1393.020 kb on + strandat 1393.028 kb on - strandat 1393.031 kb on - strandat 1393.035 kb on - strandat 1393.037 kb on + strandat 1393.039 kb on - strandat 1393.045 kb on + strandat 1393.045 kb on + strandat 1393.053 kb on - strandat 1393.057 kb on + strandat 1393.065 kb on + strandat 1393.067 kb on + strandat 1393.077 kb on + strandat 1393.077 kb on + strandat 1393.078 kb on - strandat 1393.085 kb on - strandat 1393.085 kb on - strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.087 kb on + strandat 1393.094 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.095 kb on - strandat 1393.098 kb on + strandat 1393.106 kb on - strandat 1393.119 kb on + strandat 1393.136 kb on + strandat 1393.136 kb on + strandat 1393.149 kb on - strandat 1393.179 kb on - strandat 1393.183 kb on - strandat 1393.185 kb on + strandat 1393.185 kb on + strandat 1393.185 kb on + strandat 1393.188 kb on - strandat 1393.206 kb on + strandat 1393.206 kb on + strandat 1393.206 kb on + strandat 1393.206 kb on + strandat 1393.206 kb on + strandat 1393.264 kb on + strandat 1393.315 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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1,392,558 - Dsui_1335 0.70 +0.4
1,392,558 - Dsui_1335 0.70 +0.9
1,392,566 - Dsui_1335 0.70 +0.9
1,392,574 - Dsui_1335 0.71 +0.8
1,392,575 - Dsui_1335 0.71 +0.2
1,392,580 - Dsui_1335 0.71 +0.4
1,392,587 + Dsui_1335 0.72 -0.6
1,392,606 + Dsui_1335 0.73 +0.1
1,392,619 + Dsui_1335 0.74 +0.8
1,392,627 - Dsui_1335 0.75 +0.8
1,392,627 - Dsui_1335 0.75 +0.1
1,392,636 + Dsui_1335 0.75 +0.2
1,392,639 - Dsui_1335 0.76 +0.6
1,392,641 + Dsui_1335 0.76 +0.0
1,392,644 - Dsui_1335 0.76 +0.8
1,392,644 - Dsui_1335 0.76 +0.1
1,392,646 + Dsui_1335 0.76 +0.8
1,392,649 - Dsui_1335 0.76 +0.9
1,392,654 + Dsui_1335 0.77 +0.7
1,392,666 - Dsui_1335 0.78 +0.4
1,392,672 + Dsui_1335 0.78 -0.3
1,392,672 + Dsui_1335 0.78 +1.0
1,392,680 - Dsui_1335 0.79 +0.6
1,392,682 + Dsui_1335 0.79 +0.4
1,392,686 + Dsui_1335 0.79 +0.3
1,392,692 + Dsui_1335 0.80 +0.8
1,392,692 + Dsui_1335 0.80 +0.6
1,392,694 - Dsui_1335 0.80 +0.6
1,392,700 - Dsui_1335 0.80 +0.5
1,392,701 + Dsui_1335 0.80 +0.5
1,392,701 + Dsui_1335 0.80 +0.6
1,392,710 - Dsui_1335 0.81 +0.2
1,392,737 + Dsui_1335 0.83 +0.5
1,392,742 + Dsui_1335 0.83 +0.1
1,392,750 + Dsui_1335 0.84 +0.4
1,392,750 + Dsui_1335 0.84 +0.4
1,392,750 + Dsui_1335 0.84 +1.0
1,392,750 + Dsui_1335 0.84 +1.5
1,392,750 + Dsui_1335 0.84 +0.7
1,392,750 + Dsui_1335 0.84 -1.2
1,392,751 + Dsui_1335 0.84 +0.1
1,392,752 - Dsui_1335 0.84 +0.1
1,392,752 - Dsui_1335 0.84 +0.9
1,392,752 - Dsui_1335 0.84 +1.0
1,392,758 - Dsui_1335 0.84 +0.1
1,392,758 - Dsui_1335 0.84 +0.2
1,392,758 - Dsui_1335 0.84 +0.2
1,392,758 - Dsui_1335 0.84 +0.5
1,392,758 - Dsui_1335 0.84 +0.7
1,392,758 - Dsui_1335 0.84 +0.5
1,392,758 - Dsui_1335 0.84 +0.8
1,392,760 - Dsui_1335 0.85 -0.0
1,392,763 - Dsui_1335 0.85 +0.9
1,392,766 + Dsui_1335 0.85 +0.6
1,392,768 - Dsui_1335 0.85 +0.0
1,392,768 - Dsui_1335 0.85 +1.0
1,392,773 + Dsui_1335 0.86 +1.2
1,392,773 + Dsui_1335 0.86 +1.4
1,392,773 + Dsui_1335 0.86 +0.5
1,392,773 + Dsui_1335 0.86 +0.4
1,392,773 + Dsui_1335 0.86 +0.5
1,392,773 + Dsui_1335 0.86 +0.8
1,392,774 - Dsui_1335 0.86 -0.2
1,392,774 - Dsui_1335 0.86 +0.6
1,392,781 - Dsui_1335 0.86 +0.7
1,392,781 - Dsui_1335 0.86 +0.6
1,392,781 - Dsui_1335 0.86 +0.6
1,392,786 + Dsui_1335 0.87 +0.3
1,392,788 - Dsui_1335 0.87 +0.5
1,392,792 + Dsui_1335 0.87 +1.0
1,392,799 + Dsui_1335 0.88 -0.5
1,392,799 + Dsui_1335 0.88 +0.7
1,392,799 + Dsui_1335 0.88 +0.8
1,392,799 + Dsui_1335 0.88 +0.4
1,392,799 - Dsui_1335 0.88 +0.2
1,392,807 - Dsui_1335 0.88 +0.8
1,392,807 - Dsui_1335 0.88 +0.6
1,392,807 - Dsui_1335 0.88 +0.7
1,392,807 - Dsui_1335 0.88 +0.5
1,392,807 - Dsui_1335 0.88 +0.5
1,392,807 - Dsui_1335 0.88 +0.5
1,392,807 - Dsui_1335 0.88 +0.8
1,392,822 - Dsui_1335 0.89 +0.6
1,392,844 + +0.7
1,392,846 + +0.7
1,392,846 + +0.0
1,392,846 + +0.5
1,392,851 + +0.3
1,392,851 + +0.3
1,392,854 - -0.1
1,392,856 + -0.8
1,392,856 + +0.8
1,392,857 + +0.1
1,392,857 + +0.3
1,392,857 + +0.7
1,392,857 + -2.0
1,392,857 + -0.6
1,392,859 - -0.2
1,392,864 + -2.3
1,392,864 - +0.6
1,392,865 - +0.7
1,392,865 - +1.2
1,392,925 + +1.0
1,392,933 + -0.0
1,392,934 - +0.5
1,392,939 - +1.1
1,392,939 - +0.1
1,392,941 - +0.4
1,392,946 - +0.4
1,392,948 - -0.8
1,392,949 - +1.1
1,392,956 + +0.5
1,392,958 - +0.5
1,392,969 - +0.4
1,392,969 - +0.5
1,392,970 + +0.3
1,392,971 - +0.4
1,392,973 - +0.6
1,392,978 - -0.7
1,392,983 - +0.4
1,392,983 - +0.1
1,392,983 - +0.2
1,392,983 - +0.7
1,392,983 - +0.2
1,392,983 - +0.3
1,392,983 - +0.1
1,392,983 - +0.7
1,392,988 + +1.1
1,392,997 + +0.6
1,393,002 + +0.3
1,393,003 + -0.3
1,393,003 + +0.7
1,393,003 + -0.8
1,393,003 + -0.2
1,393,003 + +0.2
1,393,003 + -0.2
1,393,003 + +0.3
1,393,003 + -0.1
1,393,003 + +0.4
1,393,003 + -0.1
1,393,006 - +0.7
1,393,011 - +1.0
1,393,011 - -0.3
1,393,011 - -0.4
1,393,011 - +0.6
1,393,011 - +0.1
1,393,011 - -1.0
1,393,013 - -2.0
1,393,020 + -0.4
1,393,020 + -0.0
1,393,028 - -2.4
1,393,031 - -0.6
1,393,035 - +0.3
1,393,037 + -0.6
1,393,039 - -0.5
1,393,045 + -0.4
1,393,045 + +0.5
1,393,053 - -1.7
1,393,057 + +0.4
1,393,065 + -0.3
1,393,067 + -0.2
1,393,077 + -0.1
1,393,077 + -0.2
1,393,078 - +0.4
1,393,085 - -2.2
1,393,085 - +0.0
1,393,087 + +0.2
1,393,087 + +0.4
1,393,087 + +0.1
1,393,087 + -0.5
1,393,087 + -0.2
1,393,087 + -0.4
1,393,087 + -0.5
1,393,087 + -0.3
1,393,094 - -0.2
1,393,095 - -0.7
1,393,095 - -1.1
1,393,095 - -1.5
1,393,095 - -1.1
1,393,095 - +0.4
1,393,095 - -1.6
1,393,095 - -1.7
1,393,098 + -0.4
1,393,106 - -1.3
1,393,119 + -0.7
1,393,136 + -0.5
1,393,136 + +0.1
1,393,149 - -2.8
1,393,179 - -1.3
1,393,183 - +1.2
1,393,185 + -0.9
1,393,185 + +0.1
1,393,185 + -0.7
1,393,188 - -1.0
1,393,206 + +0.1
1,393,206 + -0.6
1,393,206 + +0.1
1,393,206 + +0.0
1,393,206 + +0.0
1,393,264 + -0.1
1,393,315 + -0.4

Or see this region's nucleotide sequence