Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1328 and Dsui_1329 are separated by 37 nucleotides Dsui_1329 and Dsui_1330 are separated by 500 nucleotides Dsui_1330 and Dsui_1331 are separated by 9 nucleotides Dsui_1331 and Dsui_1332 are separated by 182 nucleotides
Dsui_1328: Dsui_1328 - ubiquinone biosynthesis protein COQ7, at 1,387,370 to 1,387,993
_1328
Dsui_1329: Dsui_1329 - putative redox protein, regulator of disulfide bond formation, at 1,388,031 to 1,388,447
_1329
Dsui_1330: Dsui_1330 - ribosomal protein L13, bacterial type, at 1,388,948 to 1,389,376
_1330
Dsui_1331: Dsui_1331 - ribosomal protein S9, at 1,389,386 to 1,389,778
_1331
Dsui_1332: Dsui_1332 - hypothetical protein, at 1,389,961 to 1,390,722
_1332
Position (kb)
1388
1389
1390 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1388.002 kb on - strand at 1388.009 kb on + strand at 1388.014 kb on + strand at 1388.017 kb on - strand at 1388.022 kb on - strand at 1388.022 kb on - strand at 1388.051 kb on + strand at 1388.059 kb on - strand at 1388.079 kb on - strand, within Dsui_1329 at 1388.079 kb on - strand, within Dsui_1329 at 1388.098 kb on - strand, within Dsui_1329 at 1388.103 kb on - strand, within Dsui_1329 at 1388.103 kb on - strand, within Dsui_1329 at 1388.108 kb on - strand, within Dsui_1329 at 1388.125 kb on + strand, within Dsui_1329 at 1388.165 kb on + strand, within Dsui_1329 at 1388.194 kb on + strand, within Dsui_1329 at 1388.194 kb on + strand, within Dsui_1329 at 1388.194 kb on + strand, within Dsui_1329 at 1388.201 kb on + strand, within Dsui_1329 at 1388.201 kb on + strand, within Dsui_1329 at 1388.202 kb on - strand, within Dsui_1329 at 1388.221 kb on + strand, within Dsui_1329 at 1388.224 kb on - strand, within Dsui_1329 at 1388.226 kb on + strand, within Dsui_1329 at 1388.229 kb on - strand, within Dsui_1329 at 1388.241 kb on + strand, within Dsui_1329 at 1388.241 kb on - strand, within Dsui_1329 at 1388.282 kb on + strand, within Dsui_1329 at 1388.282 kb on + strand, within Dsui_1329 at 1388.284 kb on - strand, within Dsui_1329 at 1388.290 kb on - strand, within Dsui_1329 at 1388.290 kb on - strand, within Dsui_1329 at 1388.290 kb on - strand, within Dsui_1329 at 1388.290 kb on - strand, within Dsui_1329 at 1388.297 kb on - strand, within Dsui_1329 at 1388.300 kb on + strand, within Dsui_1329 at 1388.300 kb on + strand, within Dsui_1329 at 1388.303 kb on - strand, within Dsui_1329 at 1388.336 kb on + strand, within Dsui_1329 at 1388.336 kb on + strand, within Dsui_1329 at 1388.343 kb on + strand, within Dsui_1329 at 1388.343 kb on + strand, within Dsui_1329 at 1388.349 kb on + strand, within Dsui_1329 at 1388.376 kb on + strand, within Dsui_1329 at 1388.381 kb on + strand, within Dsui_1329 at 1388.381 kb on + strand, within Dsui_1329 at 1388.381 kb on - strand, within Dsui_1329 at 1388.384 kb on - strand, within Dsui_1329 at 1388.388 kb on + strand, within Dsui_1329 at 1388.388 kb on + strand, within Dsui_1329 at 1388.391 kb on - strand, within Dsui_1329 at 1388.434 kb on + strand at 1388.435 kb on - strand at 1388.442 kb on - strand at 1388.442 kb on - strand at 1388.448 kb on + strand at 1388.448 kb on + strand at 1388.455 kb on - strand at 1388.455 kb on - strand at 1388.456 kb on - strand at 1388.456 kb on - strand at 1388.480 kb on + strand at 1388.495 kb on - strand at 1388.495 kb on - strand at 1388.503 kb on + strand at 1388.505 kb on + strand at 1388.508 kb on + strand at 1388.508 kb on + strand at 1388.508 kb on + strand at 1388.508 kb on - strand at 1388.508 kb on - strand at 1388.523 kb on - strand at 1388.533 kb on + strand at 1388.541 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.543 kb on + strand at 1388.549 kb on - strand at 1388.551 kb on - strand at 1388.551 kb on - strand at 1388.551 kb on - strand at 1388.551 kb on - strand at 1388.551 kb on - strand at 1388.553 kb on + strand at 1388.554 kb on + strand at 1388.554 kb on + strand at 1388.562 kb on - strand at 1388.562 kb on - strand at 1388.565 kb on + strand at 1388.565 kb on + strand at 1388.565 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.733 kb on + strand at 1388.738 kb on + strand at 1388.767 kb on + strand at 1388.788 kb on + strand at 1388.788 kb on + strand at 1388.856 kb on + strand at 1388.864 kb on - strand at 1388.870 kb on + strand at 1388.878 kb on - strand at 1388.878 kb on - strand at 1388.886 kb on - strand at 1389.772 kb on + strand at 1389.787 kb on + strand at 1389.849 kb on - strand at 1389.854 kb on - strand at 1389.855 kb on - strand at 1389.871 kb on + strand at 1389.879 kb on - strand at 1389.888 kb on + strand at 1389.936 kb on + strand at 1389.936 kb on + strand at 1389.944 kb on - strand at 1389.958 kb on + strand at 1389.958 kb on + strand at 1390.013 kb on + strand at 1390.043 kb on + strand, within Dsui_1332 at 1390.118 kb on + strand, within Dsui_1332 at 1390.124 kb on - strand, within Dsui_1332 at 1390.124 kb on - strand, within Dsui_1332 at 1390.125 kb on - strand, within Dsui_1332 at 1390.191 kb on - strand, within Dsui_1332 at 1390.213 kb on + strand, within Dsui_1332 at 1390.225 kb on - strand, within Dsui_1332 at 1390.233 kb on + strand, within Dsui_1332 at 1390.261 kb on - strand, within Dsui_1332 at 1390.293 kb on + strand, within Dsui_1332 at 1390.293 kb on + strand, within Dsui_1332 at 1390.301 kb on - strand, within Dsui_1332 at 1390.306 kb on - strand, within Dsui_1332 at 1390.315 kb on - strand, within Dsui_1332 at 1390.326 kb on - strand, within Dsui_1332 at 1390.358 kb on + strand, within Dsui_1332 at 1390.358 kb on + strand, within Dsui_1332 at 1390.359 kb on + strand, within Dsui_1332 at 1390.360 kb on - strand, within Dsui_1332 at 1390.366 kb on - strand, within Dsui_1332 at 1390.370 kb on + strand, within Dsui_1332 at 1390.370 kb on + strand, within Dsui_1332 at 1390.371 kb on + strand, within Dsui_1332
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,388,002 - -0.4 1,388,009 + -0.4 1,388,014 + -0.6 1,388,017 - -0.9 1,388,022 - -0.0 1,388,022 - -0.5 1,388,051 + -1.9 1,388,059 - -1.0 1,388,079 - Dsui_1329 0.12 -0.9 1,388,079 - Dsui_1329 0.12 -1.4 1,388,098 - Dsui_1329 0.16 -1.1 1,388,103 - Dsui_1329 0.17 -1.0 1,388,103 - Dsui_1329 0.17 -0.7 1,388,108 - Dsui_1329 0.18 -0.9 1,388,125 + Dsui_1329 0.23 -0.3 1,388,165 + Dsui_1329 0.32 -1.2 1,388,194 + Dsui_1329 0.39 -1.0 1,388,194 + Dsui_1329 0.39 -0.8 1,388,194 + Dsui_1329 0.39 -1.2 1,388,201 + Dsui_1329 0.41 -0.7 1,388,201 + Dsui_1329 0.41 -0.7 1,388,202 - Dsui_1329 0.41 -0.5 1,388,221 + Dsui_1329 0.46 -1.5 1,388,224 - Dsui_1329 0.46 -1.0 1,388,226 + Dsui_1329 0.47 +0.2 1,388,229 - Dsui_1329 0.47 -0.9 1,388,241 + Dsui_1329 0.50 -0.9 1,388,241 - Dsui_1329 0.50 -1.1 1,388,282 + Dsui_1329 0.60 -0.9 1,388,282 + Dsui_1329 0.60 -2.1 1,388,284 - Dsui_1329 0.61 -0.6 1,388,290 - Dsui_1329 0.62 -0.7 1,388,290 - Dsui_1329 0.62 -1.2 1,388,290 - Dsui_1329 0.62 -1.1 1,388,290 - Dsui_1329 0.62 -0.8 1,388,297 - Dsui_1329 0.64 -0.8 1,388,300 + Dsui_1329 0.65 -1.3 1,388,300 + Dsui_1329 0.65 -1.6 1,388,303 - Dsui_1329 0.65 -0.5 1,388,336 + Dsui_1329 0.73 -1.1 1,388,336 + Dsui_1329 0.73 -0.9 1,388,343 + Dsui_1329 0.75 -1.2 1,388,343 + Dsui_1329 0.75 -0.7 1,388,349 + Dsui_1329 0.76 -0.7 1,388,376 + Dsui_1329 0.83 -1.2 1,388,381 + Dsui_1329 0.84 -1.0 1,388,381 + Dsui_1329 0.84 -1.3 1,388,381 - Dsui_1329 0.84 -0.9 1,388,384 - Dsui_1329 0.85 -1.4 1,388,388 + Dsui_1329 0.86 -1.4 1,388,388 + Dsui_1329 0.86 +0.3 1,388,391 - Dsui_1329 0.86 -2.8 1,388,434 + -1.6 1,388,435 - -0.6 1,388,442 - -1.0 1,388,442 - -1.3 1,388,448 + -1.0 1,388,448 + -1.5 1,388,455 - -0.7 1,388,455 - -0.7 1,388,456 - -0.4 1,388,456 - -1.0 1,388,480 + -0.0 1,388,495 - -2.4 1,388,495 - -0.7 1,388,503 + -0.7 1,388,505 + -0.2 1,388,508 + -0.5 1,388,508 + -1.0 1,388,508 + -2.1 1,388,508 - -0.5 1,388,508 - +0.6 1,388,523 - -0.4 1,388,533 + -0.5 1,388,541 + -1.4 1,388,543 + -0.6 1,388,543 + -0.5 1,388,543 + -0.7 1,388,543 + -0.4 1,388,543 + -0.3 1,388,543 + -0.4 1,388,543 + +0.1 1,388,549 - -1.4 1,388,551 - -0.8 1,388,551 - -2.0 1,388,551 - -0.4 1,388,551 - -1.0 1,388,551 - -0.2 1,388,553 + -0.9 1,388,554 + -1.3 1,388,554 + -1.0 1,388,562 - -0.7 1,388,562 - -0.3 1,388,565 + -0.6 1,388,565 + -0.7 1,388,565 + -0.6 1,388,733 + -1.4 1,388,733 + -2.6 1,388,733 + -2.4 1,388,733 + -2.8 1,388,733 + -0.1 1,388,733 + -1.6 1,388,733 + -2.8 1,388,738 + -1.8 1,388,767 + -1.6 1,388,788 + -3.0 1,388,788 + -3.6 1,388,856 + -0.3 1,388,864 - -0.2 1,388,870 + -0.4 1,388,878 - +0.3 1,388,878 - -2.9 1,388,886 - +0.1 1,389,772 + -0.2 1,389,787 + -0.2 1,389,849 - +0.2 1,389,854 - -0.3 1,389,855 - +0.4 1,389,871 + +0.0 1,389,879 - -0.0 1,389,888 + +0.2 1,389,936 + +0.1 1,389,936 + +0.3 1,389,944 - +0.2 1,389,958 + -0.1 1,389,958 + -0.9 1,390,013 + +0.0 1,390,043 + Dsui_1332 0.11 +0.3 1,390,118 + Dsui_1332 0.21 +0.7 1,390,124 - Dsui_1332 0.21 +0.7 1,390,124 - Dsui_1332 0.21 +0.4 1,390,125 - Dsui_1332 0.22 +0.7 1,390,191 - Dsui_1332 0.30 -0.2 1,390,213 + Dsui_1332 0.33 +0.1 1,390,225 - Dsui_1332 0.35 +0.5 1,390,233 + Dsui_1332 0.36 +0.9 1,390,261 - Dsui_1332 0.39 -0.3 1,390,293 + Dsui_1332 0.44 +0.0 1,390,293 + Dsui_1332 0.44 +0.3 1,390,301 - Dsui_1332 0.45 -0.2 1,390,306 - Dsui_1332 0.45 +0.4 1,390,315 - Dsui_1332 0.46 +0.2 1,390,326 - Dsui_1332 0.48 +0.1 1,390,358 + Dsui_1332 0.52 +0.4 1,390,358 + Dsui_1332 0.52 +0.6 1,390,359 + Dsui_1332 0.52 +0.4 1,390,360 - Dsui_1332 0.52 +0.1 1,390,366 - Dsui_1332 0.53 +0.7 1,390,370 + Dsui_1332 0.54 +0.3 1,390,370 + Dsui_1332 0.54 -0.2 1,390,371 + Dsui_1332 0.54 -0.3
Or see this region's nucleotide sequence