Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1203 and Dsui_1204 are separated by 23 nucleotides Dsui_1204 and Dsui_1205 are separated by 136 nucleotides Dsui_1205 and Dsui_1206 are separated by 7 nucleotides Dsui_1206 and Dsui_1207 are separated by 51 nucleotides
Dsui_1203: Dsui_1203 - putative metal-dependent hydrolase, at 1,255,918 to 1,256,694
_1203
Dsui_1204: Dsui_1204 - lactoylglutathione lyase, at 1,256,718 to 1,257,104
_1204
Dsui_1205: Dsui_1205 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 1,257,241 to 1,257,603
_1205
Dsui_1206: Dsui_1206 - hypothetical protein, at 1,257,611 to 1,258,219
_1206
Dsui_1207: Dsui_1207 - putative calcium-binding protein, at 1,258,271 to 1,265,536
_1207
Position (kb)
1257
1258 Strain fitness (log2 ratio)
-2
-1
0
1 at 1256.384 kb on + strand, within Dsui_1203 at 1256.392 kb on - strand, within Dsui_1203 at 1256.430 kb on - strand, within Dsui_1203 at 1256.430 kb on - strand, within Dsui_1203 at 1256.646 kb on + strand at 1256.670 kb on + strand at 1256.759 kb on - strand, within Dsui_1204 at 1256.769 kb on + strand, within Dsui_1204 at 1256.769 kb on - strand, within Dsui_1204 at 1256.892 kb on - strand, within Dsui_1204 at 1256.911 kb on + strand, within Dsui_1204 at 1256.929 kb on + strand, within Dsui_1204 at 1257.034 kb on + strand, within Dsui_1204 at 1257.214 kb on - strand at 1257.224 kb on - strand at 1257.339 kb on - strand, within Dsui_1205 at 1257.436 kb on - strand, within Dsui_1205 at 1257.447 kb on + strand, within Dsui_1205 at 1257.540 kb on + strand, within Dsui_1205 at 1257.588 kb on - strand at 1257.717 kb on - strand, within Dsui_1206 at 1257.860 kb on - strand, within Dsui_1206 at 1258.059 kb on + strand, within Dsui_1206 at 1258.092 kb on - strand, within Dsui_1206 at 1258.133 kb on - strand, within Dsui_1206 at 1258.212 kb on - strand at 1258.245 kb on - strand at 1258.345 kb on + strand at 1258.478 kb on + strand at 1258.586 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,256,384 + Dsui_1203 0.60 -0.1 1,256,392 - Dsui_1203 0.61 -1.4 1,256,430 - Dsui_1203 0.66 +0.8 1,256,430 - Dsui_1203 0.66 -1.8 1,256,646 + -0.1 1,256,670 + +0.2 1,256,759 - Dsui_1204 0.11 -0.2 1,256,769 + Dsui_1204 0.13 -1.3 1,256,769 - Dsui_1204 0.13 -0.0 1,256,892 - Dsui_1204 0.45 +0.1 1,256,911 + Dsui_1204 0.50 -0.2 1,256,929 + Dsui_1204 0.55 -0.2 1,257,034 + Dsui_1204 0.82 -0.2 1,257,214 - -0.1 1,257,224 - +0.1 1,257,339 - Dsui_1205 0.27 +0.0 1,257,436 - Dsui_1205 0.54 +0.1 1,257,447 + Dsui_1205 0.57 +0.3 1,257,540 + Dsui_1205 0.82 -0.6 1,257,588 - -0.5 1,257,717 - Dsui_1206 0.17 +0.0 1,257,860 - Dsui_1206 0.41 +0.7 1,258,059 + Dsui_1206 0.74 -0.0 1,258,092 - Dsui_1206 0.79 -0.4 1,258,133 - Dsui_1206 0.86 -1.0 1,258,212 - -0.1 1,258,245 - -0.5 1,258,345 + +0.6 1,258,478 + +0.8 1,258,586 - -1.1
Or see this region's nucleotide sequence