Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1113 and Dsui_1114 are separated by 162 nucleotides Dsui_1114 and Dsui_1115 are separated by 92 nucleotides
Dsui_1113: Dsui_1113 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,160,202 to 1,161,038
_1113
Dsui_1114: Dsui_1114 - coenzyme F390 synthetase, at 1,161,201 to 1,162,433
_1114
Dsui_1115: Dsui_1115 - putative acyl-CoA transferase/carnitine dehydratase, at 1,162,526 to 1,163,692
_1115
Position (kb)
1161
1162
1163 Strain fitness (log2 ratio)
-1
0
1 at 1160.330 kb on + strand, within Dsui_1113 at 1160.511 kb on + strand, within Dsui_1113 at 1160.516 kb on + strand, within Dsui_1113 at 1160.534 kb on - strand, within Dsui_1113 at 1160.650 kb on + strand, within Dsui_1113 at 1160.709 kb on + strand, within Dsui_1113 at 1160.843 kb on + strand, within Dsui_1113 at 1160.920 kb on + strand, within Dsui_1113 at 1160.926 kb on - strand, within Dsui_1113 at 1160.962 kb on - strand at 1161.007 kb on - strand at 1161.044 kb on - strand at 1161.145 kb on - strand at 1161.146 kb on - strand at 1161.327 kb on - strand, within Dsui_1114 at 1161.461 kb on + strand, within Dsui_1114 at 1161.468 kb on + strand, within Dsui_1114 at 1161.488 kb on + strand, within Dsui_1114 at 1161.517 kb on + strand, within Dsui_1114 at 1161.617 kb on - strand, within Dsui_1114 at 1161.687 kb on - strand, within Dsui_1114 at 1161.732 kb on + strand, within Dsui_1114 at 1161.802 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.809 kb on - strand, within Dsui_1114 at 1161.867 kb on - strand, within Dsui_1114 at 1161.886 kb on + strand, within Dsui_1114 at 1161.931 kb on + strand, within Dsui_1114 at 1161.938 kb on - strand, within Dsui_1114 at 1162.024 kb on - strand, within Dsui_1114 at 1162.129 kb on - strand, within Dsui_1114 at 1162.133 kb on + strand, within Dsui_1114 at 1162.247 kb on - strand, within Dsui_1114 at 1162.280 kb on - strand, within Dsui_1114 at 1162.280 kb on - strand, within Dsui_1114 at 1162.288 kb on - strand, within Dsui_1114 at 1162.352 kb on - strand at 1162.415 kb on + strand at 1162.482 kb on - strand at 1162.540 kb on + strand at 1162.565 kb on - strand at 1162.565 kb on - strand at 1162.596 kb on + strand at 1162.680 kb on + strand, within Dsui_1115 at 1162.690 kb on + strand, within Dsui_1115 at 1163.152 kb on - strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.365 kb on + strand, within Dsui_1115 at 1163.392 kb on + strand, within Dsui_1115 at 1163.424 kb on - strand, within Dsui_1115 at 1163.427 kb on - strand, within Dsui_1115
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,160,330 + Dsui_1113 0.15 +0.1 1,160,511 + Dsui_1113 0.37 +1.0 1,160,516 + Dsui_1113 0.38 -0.2 1,160,534 - Dsui_1113 0.40 -0.6 1,160,650 + Dsui_1113 0.54 +0.4 1,160,709 + Dsui_1113 0.61 -0.1 1,160,843 + Dsui_1113 0.77 -1.0 1,160,920 + Dsui_1113 0.86 +1.4 1,160,926 - Dsui_1113 0.86 -0.4 1,160,962 - +1.4 1,161,007 - -0.2 1,161,044 - -0.4 1,161,145 - +0.0 1,161,146 - -0.5 1,161,327 - Dsui_1114 0.10 +1.4 1,161,461 + Dsui_1114 0.21 +0.6 1,161,468 + Dsui_1114 0.22 -0.2 1,161,488 + Dsui_1114 0.23 +0.5 1,161,517 + Dsui_1114 0.26 +0.0 1,161,617 - Dsui_1114 0.34 +0.1 1,161,687 - Dsui_1114 0.39 +1.0 1,161,732 + Dsui_1114 0.43 -0.5 1,161,802 - Dsui_1114 0.49 +0.0 1,161,809 - Dsui_1114 0.49 -0.0 1,161,809 - Dsui_1114 0.49 -0.4 1,161,867 - Dsui_1114 0.54 -0.4 1,161,886 + Dsui_1114 0.56 -0.1 1,161,931 + Dsui_1114 0.59 -0.5 1,161,938 - Dsui_1114 0.60 +0.2 1,162,024 - Dsui_1114 0.67 -0.0 1,162,129 - Dsui_1114 0.75 -0.2 1,162,133 + Dsui_1114 0.76 +0.1 1,162,247 - Dsui_1114 0.85 +0.3 1,162,280 - Dsui_1114 0.88 +0.2 1,162,280 - Dsui_1114 0.88 -0.0 1,162,288 - Dsui_1114 0.88 +0.3 1,162,352 - -0.6 1,162,415 + -0.3 1,162,482 - -1.1 1,162,540 + -1.2 1,162,565 - -1.5 1,162,565 - +0.0 1,162,596 + +0.3 1,162,680 + Dsui_1115 0.13 -1.4 1,162,690 + Dsui_1115 0.14 -0.7 1,163,152 - Dsui_1115 0.54 -0.2 1,163,365 + Dsui_1115 0.72 -0.8 1,163,365 + Dsui_1115 0.72 +0.2 1,163,392 + Dsui_1115 0.74 -0.4 1,163,424 - Dsui_1115 0.77 -0.2 1,163,427 - Dsui_1115 0.77 -0.0
Or see this region's nucleotide sequence