Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0746 and Dsui_0747 are separated by 94 nucleotides Dsui_0747 and Dsui_0748 are separated by 173 nucleotides
Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755
_0746
Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130
_0747
Dsui_0748: Dsui_0748 - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, at 746,304 to 747,302
_0748
Position (kb) 744
745
746
747 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 743.863 kb on - strand at 743.955 kb on - strand, within Dsui_0746 at 744.017 kb on + strand, within Dsui_0746 at 744.104 kb on - strand, within Dsui_0746 at 744.137 kb on - strand, within Dsui_0746 at 744.152 kb on - strand, within Dsui_0746 at 744.165 kb on + strand, within Dsui_0746 at 744.192 kb on + strand, within Dsui_0746 at 744.245 kb on + strand at 744.325 kb on - strand, within Dsui_0746 at 744.350 kb on - strand, within Dsui_0746 at 744.358 kb on - strand, within Dsui_0746 at 744.403 kb on + strand, within Dsui_0746 at 744.436 kb on + strand, within Dsui_0746 at 744.438 kb on - strand, within Dsui_0746 at 744.455 kb on + strand at 744.459 kb on + strand at 744.471 kb on - strand, within Dsui_0746 at 744.545 kb on - strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.654 kb on + strand, within Dsui_0746 at 744.712 kb on + strand at 744.712 kb on + strand at 744.712 kb on + strand at 744.717 kb on + strand at 744.720 kb on - strand at 744.722 kb on + strand at 744.722 kb on + strand at 744.803 kb on + strand at 744.829 kb on - strand at 744.840 kb on + strand at 744.955 kb on - strand at 744.999 kb on - strand, within Dsui_0747 at 745.019 kb on - strand, within Dsui_0747 at 745.143 kb on - strand, within Dsui_0747 at 745.178 kb on - strand, within Dsui_0747 at 745.189 kb on - strand, within Dsui_0747 at 745.607 kb on - strand, within Dsui_0747 at 745.614 kb on + strand at 745.683 kb on + strand, within Dsui_0747 at 745.701 kb on + strand, within Dsui_0747 at 745.709 kb on - strand, within Dsui_0747 at 745.976 kb on - strand, within Dsui_0747 at 746.091 kb on + strand at 746.301 kb on + strand at 746.301 kb on + strand at 746.301 kb on + strand at 746.309 kb on - strand at 746.309 kb on - strand at 746.309 kb on - strand at 746.309 kb on - strand at 746.358 kb on + strand at 746.493 kb on - strand, within Dsui_0748 at 746.557 kb on - strand, within Dsui_0748 at 746.593 kb on + strand, within Dsui_0748 at 746.614 kb on + strand, within Dsui_0748 at 746.667 kb on + strand, within Dsui_0748 at 746.710 kb on - strand at 746.710 kb on - strand, within Dsui_0748 at 746.710 kb on - strand at 746.754 kb on - strand at 746.783 kb on + strand, within Dsui_0748 at 746.862 kb on + strand, within Dsui_0748 at 746.919 kb on + strand, within Dsui_0748 at 746.940 kb on + strand, within Dsui_0748 at 747.108 kb on - strand, within Dsui_0748 at 747.110 kb on + strand, within Dsui_0748 at 747.110 kb on + strand, within Dsui_0748 at 747.127 kb on + strand, within Dsui_0748 at 747.127 kb on + strand, within Dsui_0748
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 743,863 - +0.8 743,955 - Dsui_0746 0.16 +1.7 744,017 + Dsui_0746 0.22 +2.2 744,104 - Dsui_0746 0.31 +1.5 744,137 - Dsui_0746 0.35 +1.3 744,152 - Dsui_0746 0.36 -1.2 744,165 + Dsui_0746 0.38 +3.1 744,192 + Dsui_0746 0.41 +1.8 744,245 + +0.7 744,325 - Dsui_0746 0.55 +1.7 744,350 - Dsui_0746 0.57 +1.9 744,358 - Dsui_0746 0.58 +0.6 744,403 + Dsui_0746 0.63 +1.2 744,436 + Dsui_0746 0.66 +2.5 744,438 - Dsui_0746 0.66 +0.4 744,455 + +1.2 744,459 + +0.1 744,471 - Dsui_0746 0.70 +1.6 744,545 - Dsui_0746 0.78 +0.5 744,626 + Dsui_0746 0.86 +5.1 744,626 + Dsui_0746 0.86 +0.3 744,654 + Dsui_0746 0.89 +2.4 744,712 + +1.5 744,712 + +4.7 744,712 + +2.3 744,717 + +3.5 744,720 - +0.7 744,722 + +2.9 744,722 + +3.1 744,803 + +0.2 744,829 - +0.0 744,840 + -0.5 744,955 - -0.9 744,999 - Dsui_0747 0.12 +2.1 745,019 - Dsui_0747 0.13 +2.9 745,143 - Dsui_0747 0.23 +1.4 745,178 - Dsui_0747 0.26 +1.7 745,189 - Dsui_0747 0.26 +4.6 745,607 - Dsui_0747 0.59 +2.4 745,614 + +2.2 745,683 + Dsui_0747 0.65 +2.8 745,701 + Dsui_0747 0.66 +1.7 745,709 - Dsui_0747 0.67 +2.7 745,976 - Dsui_0747 0.88 +2.0 746,091 + +0.1 746,301 + -1.3 746,301 + +0.8 746,301 + -0.7 746,309 - +1.4 746,309 - +1.3 746,309 - +1.7 746,309 - +1.2 746,358 + +0.7 746,493 - Dsui_0748 0.19 +1.3 746,557 - Dsui_0748 0.25 +1.1 746,593 + Dsui_0748 0.29 +0.8 746,614 + Dsui_0748 0.31 +0.6 746,667 + Dsui_0748 0.36 +0.6 746,710 - +0.9 746,710 - Dsui_0748 0.41 +0.9 746,710 - +0.1 746,754 - +3.2 746,783 + Dsui_0748 0.48 +1.8 746,862 + Dsui_0748 0.56 -0.0 746,919 + Dsui_0748 0.62 -0.1 746,940 + Dsui_0748 0.64 +1.2 747,108 - Dsui_0748 0.80 +1.7 747,110 + Dsui_0748 0.81 +0.1 747,110 + Dsui_0748 0.81 +0.2 747,127 + Dsui_0748 0.82 +0.2 747,127 + Dsui_0748 0.82 +1.0
Or see this region's nucleotide sequence