Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0578 and Dsui_0579 are separated by 211 nucleotides Dsui_0579 and Dsui_0580 are separated by 110 nucleotides
Dsui_0578: Dsui_0578 - homocitrate synthase NifV, at 575,480 to 576,634
_0578
Dsui_0579: Dsui_0579 - putative permease, at 576,846 to 577,721
_0579
Dsui_0580: Dsui_0580 - ATP-dependent protease HslVU, ATPase subunit, at 577,832 to 579,169
_0580
Position (kb) 576
577
578 Strain fitness (log2 ratio) -1
0
1 at 575.962 kb on + strand, within Dsui_0578 at 575.977 kb on - strand, within Dsui_0578 at 575.982 kb on + strand, within Dsui_0578 at 575.990 kb on - strand, within Dsui_0578 at 576.216 kb on - strand, within Dsui_0578 at 576.271 kb on - strand, within Dsui_0578 at 576.399 kb on - strand, within Dsui_0578 at 576.424 kb on + strand, within Dsui_0578 at 576.431 kb on - strand, within Dsui_0578 at 576.450 kb on - strand, within Dsui_0578 at 576.609 kb on + strand at 576.649 kb on - strand at 576.787 kb on - strand at 576.788 kb on - strand at 576.789 kb on + strand at 576.789 kb on + strand at 576.906 kb on - strand at 576.927 kb on + strand at 576.999 kb on + strand, within Dsui_0579 at 577.006 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.194 kb on + strand, within Dsui_0579 at 577.315 kb on - strand, within Dsui_0579 at 577.342 kb on - strand, within Dsui_0579 at 577.360 kb on - strand, within Dsui_0579 at 577.373 kb on - strand, within Dsui_0579 at 577.457 kb on - strand, within Dsui_0579 at 577.482 kb on - strand, within Dsui_0579 at 577.732 kb on + strand at 577.758 kb on - strand at 577.891 kb on + strand at 577.974 kb on + strand, within Dsui_0580 at 577.979 kb on - strand, within Dsui_0580 at 578.012 kb on - strand, within Dsui_0580 at 578.022 kb on - strand, within Dsui_0580 at 578.090 kb on - strand, within Dsui_0580 at 578.107 kb on - strand, within Dsui_0580 at 578.157 kb on + strand, within Dsui_0580 at 578.212 kb on + strand, within Dsui_0580 at 578.437 kb on - strand, within Dsui_0580
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 575,962 + Dsui_0578 0.42 -0.6 575,977 - Dsui_0578 0.43 +0.1 575,982 + Dsui_0578 0.43 +0.2 575,990 - Dsui_0578 0.44 +0.0 576,216 - Dsui_0578 0.64 +0.3 576,271 - Dsui_0578 0.68 -0.3 576,399 - Dsui_0578 0.80 -0.4 576,424 + Dsui_0578 0.82 +0.0 576,431 - Dsui_0578 0.82 -0.1 576,450 - Dsui_0578 0.84 -1.5 576,609 + -0.3 576,649 - -0.2 576,787 - -0.6 576,788 - -0.4 576,789 + -0.1 576,789 + -1.1 576,906 - +0.1 576,927 + -0.0 576,999 + Dsui_0579 0.17 +0.2 577,006 + Dsui_0579 0.18 -0.6 577,194 + Dsui_0579 0.40 +0.2 577,194 + Dsui_0579 0.40 -0.4 577,315 - Dsui_0579 0.54 -1.2 577,342 - Dsui_0579 0.57 -0.8 577,360 - Dsui_0579 0.59 -0.3 577,373 - Dsui_0579 0.60 -1.1 577,457 - Dsui_0579 0.70 -0.4 577,482 - Dsui_0579 0.73 -0.6 577,732 + +0.2 577,758 - +1.0 577,891 + +0.5 577,974 + Dsui_0580 0.11 +0.7 577,979 - Dsui_0580 0.11 -0.5 578,012 - Dsui_0580 0.13 -1.2 578,022 - Dsui_0580 0.14 -0.2 578,090 - Dsui_0580 0.19 -0.1 578,107 - Dsui_0580 0.21 +0.0 578,157 + Dsui_0580 0.24 +0.3 578,212 + Dsui_0580 0.28 -0.8 578,437 - Dsui_0580 0.45 +0.9
Or see this region's nucleotide sequence