Strain Fitness in Dechlorosoma suillum PS around Dsui_0243

Experiment: Anaero. lactate (C), perchlorate electron acceptor

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDsui_0242 and Dsui_0243 overlap by 4 nucleotidesDsui_0243 and Dsui_0244 are separated by 1 nucleotidesDsui_0244 and Dsui_0245 are separated by 1 nucleotides Dsui_0242: Dsui_0242 - UDP-N-acetylmuramyl-tripeptide synthetase, at 241,753 to 243,258 _0242 Dsui_0243: Dsui_0243 - cell division protein FtsI/penicillin-binding protein 2, at 243,255 to 244,988 _0243 Dsui_0244: Dsui_0244 - cell division protein FtsL, at 244,990 to 245,259 _0244 Dsui_0245: Dsui_0245 - S-adenosyl-methyltransferase MraW, at 245,261 to 246,220 _0245 Position (kb) 243 244 245Strain fitness (log2 ratio) -1 0 1at 245.453 kb on - strand, within Dsui_0245at 245.486 kb on - strand, within Dsui_0245at 245.552 kb on - strand, within Dsui_0245

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
remove
245,453 - Dsui_0245 0.20 -1.5
245,486 - Dsui_0245 0.23 -1.2
245,552 - Dsui_0245 0.30 +0.8

Or see this region's nucleotide sequence