Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0047 and Dsui_0048 are separated by 165 nucleotides Dsui_0048 and Dsui_0049 are separated by 43 nucleotides
Dsui_0047: Dsui_0047 - putative integral membrane protein, at 43,748 to 44,518
_0047
Dsui_0048: Dsui_0048 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 44,684 to 45,622
_0048
Dsui_0049: Dsui_0049 - uncharacterized membrane-anchored protein, at 45,666 to 46,976
_0049
Position (kb) 44
45
46 Strain fitness (log2 ratio) -1
0
1
2
3 at 43.694 kb on + strand at 43.815 kb on - strand at 43.851 kb on - strand, within Dsui_0047 at 43.851 kb on - strand, within Dsui_0047 at 43.851 kb on - strand, within Dsui_0047 at 43.874 kb on - strand, within Dsui_0047 at 44.022 kb on - strand, within Dsui_0047 at 44.184 kb on - strand, within Dsui_0047 at 44.535 kb on + strand at 44.547 kb on + strand at 44.563 kb on + strand at 44.595 kb on + strand at 44.632 kb on - strand at 44.701 kb on - strand at 45.632 kb on - strand at 45.666 kb on + strand at 45.681 kb on - strand at 45.681 kb on - strand at 45.802 kb on + strand, within Dsui_0049 at 45.802 kb on + strand at 45.802 kb on + strand at 45.802 kb on + strand at 45.810 kb on - strand, within Dsui_0049 at 45.810 kb on - strand, within Dsui_0049 at 45.812 kb on + strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.863 kb on + strand, within Dsui_0049 at 45.866 kb on + strand, within Dsui_0049 at 45.907 kb on - strand, within Dsui_0049 at 46.044 kb on + strand, within Dsui_0049 at 46.052 kb on - strand, within Dsui_0049 at 46.306 kb on + strand, within Dsui_0049 at 46.323 kb on + strand, within Dsui_0049 at 46.389 kb on + strand, within Dsui_0049 at 46.416 kb on - strand, within Dsui_0049 at 46.607 kb on + strand, within Dsui_0049
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 43,694 + -0.3 43,815 - +2.2 43,851 - Dsui_0047 0.13 +0.6 43,851 - Dsui_0047 0.13 +0.0 43,851 - Dsui_0047 0.13 -0.2 43,874 - Dsui_0047 0.16 +0.9 44,022 - Dsui_0047 0.36 +1.0 44,184 - Dsui_0047 0.57 +0.3 44,535 + +0.7 44,547 + -1.0 44,563 + +0.9 44,595 + +1.3 44,632 - +0.6 44,701 - -0.3 45,632 - +0.9 45,666 + +1.9 45,681 - +0.9 45,681 - +0.9 45,802 + Dsui_0049 0.10 -0.6 45,802 + +3.2 45,802 + +0.9 45,802 + -0.5 45,810 - Dsui_0049 0.11 +0.7 45,810 - Dsui_0049 0.11 -0.0 45,812 + Dsui_0049 0.11 +0.4 45,822 - Dsui_0049 0.12 +0.6 45,822 - Dsui_0049 0.12 +0.2 45,863 + Dsui_0049 0.15 -0.5 45,866 + Dsui_0049 0.15 -0.1 45,907 - Dsui_0049 0.18 -0.1 46,044 + Dsui_0049 0.29 -0.5 46,052 - Dsui_0049 0.29 +0.1 46,306 + Dsui_0049 0.49 -1.6 46,323 + Dsui_0049 0.50 -1.0 46,389 + Dsui_0049 0.55 -0.7 46,416 - Dsui_0049 0.57 -0.1 46,607 + Dsui_0049 0.72 +1.8
Or see this region's nucleotide sequence