Strain Fitness in Shewanella amazonensis SB2B around Sama_2448

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,945,786	-		Sama_2447	0.50	-1.0
2,945,948	+		Sama_2447	0.62	-2.1
2,945,958	-		Sama_2447	0.63	-2.5
2,945,958	-		Sama_2447	0.63	-0.6
2,945,978	-		Sama_2447	0.65	-0.2
2,946,083	+		Sama_2447	0.72	-0.0
2,946,083	+		Sama_2447	0.72	+0.5
2,946,083	+		Sama_2447	0.72	+0.5
2,946,083	+		Sama_2447	0.72	-0.5
2,946,083	+		Sama_2447	0.72	-2.1
2,946,083	+		Sama_2447	0.72	-0.3
2,946,084	-		Sama_2447	0.72	-1.2
2,946,084	-		Sama_2447	0.72	-1.3
2,946,084	-		Sama_2447	0.72	-0.7
2,946,084	-		Sama_2447	0.72	+0.3
2,946,084	-		Sama_2447	0.72	-1.6
2,946,084	-		Sama_2447	0.72	+0.4
2,946,138	+		Sama_2447	0.76	-1.2
2,946,139	-		Sama_2447	0.76	+0.2
2,946,181	+		Sama_2447	0.80	-0.2
2,946,181	+		Sama_2447	0.80	+0.5
2,946,181	+		Sama_2447	0.80	-2.6
2,946,182	-		Sama_2447	0.80	-1.3
2,946,324	-				-1.6
2,946,404	+				-0.5
2,946,404	+				-0.8
2,946,404	+				+0.5
2,946,405	-				-1.5
2,946,405	-				-0.6
2,946,405	-				-2.8
2,946,405	-				-1.3
2,946,405	-				-0.5
2,946,405	-				+0.1
2,946,454	+				-2.3
2,946,454	+				-0.1
2,946,454	+				-0.7
2,946,454	+				-0.5
2,946,454	+				-1.5
2,946,455	-				+1.1
2,946,455	-				-0.9
2,946,455	-				-1.1
2,946,455	-				+0.0
2,946,455	-				-0.5
2,946,455	-				-1.2
2,946,455	-				+0.3
2,946,455	-				-0.9
2,946,455	-				-1.3
2,946,455	-				-1.3
2,946,455	-				-0.4
2,946,510	+				-0.5
2,946,510	+				-0.9
2,946,510	+				-0.8
2,946,510	+				-0.6
2,946,511	-				+1.1
2,946,513	-				-0.5
2,946,544	-				+1.1
2,946,555	+				-0.9
2,946,555	+				-1.3
2,946,555	+				-0.2
2,946,556	-				+0.7
2,946,556	-				-0.7
2,946,556	-				+0.6
2,946,556	-				+0.8
2,946,716	-				-2.1
2,946,716	-				-1.4
2,946,722	-				-1.9
2,946,734	-				+0.3
2,946,746	+				+0.5
2,946,747	-				+0.1
2,946,747	-				+0.9
2,946,828	-				-1.3
2,946,901	+		Sama_2448	0.10	-0.1
2,946,988	+		Sama_2448	0.13	-0.2
2,946,989	-		Sama_2448	0.13	+0.8
2,947,030	-		Sama_2448	0.15	-0.7
2,947,219	-		Sama_2448	0.21	-0.3
2,947,219	-		Sama_2448	0.21	-0.3
2,947,230	+		Sama_2448	0.21	-1.2
2,947,230	+		Sama_2448	0.21	+0.4
2,947,230	+		Sama_2448	0.21	+0.5
2,947,231	-		Sama_2448	0.21	+2.1
2,947,231	-		Sama_2448	0.21	-1.8
2,947,231	-		Sama_2448	0.21	+1.7
2,947,231	-		Sama_2448	0.21	-1.8
2,947,238	+		Sama_2448	0.21	-1.2
2,947,268	+		Sama_2448	0.22	-1.5
2,947,286	+		Sama_2448	0.23	-0.1
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	-2.2
2,947,286	+		Sama_2448	0.23	-0.6
2,947,286	+		Sama_2448	0.23	+0.2
2,947,286	+		Sama_2448	0.23	-1.3
2,947,286	+		Sama_2448	0.23	-1.0
2,947,286	+		Sama_2448	0.23	-0.2
2,947,286	+		Sama_2448	0.23	+1.5
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	-1.5
2,947,286	+		Sama_2448	0.23	-1.5
2,947,286	+		Sama_2448	0.23	+1.1
2,947,286	+		Sama_2448	0.23	-0.5
2,947,286	+		Sama_2448	0.23	-1.7
2,947,286	+		Sama_2448	0.23	-0.9
2,947,286	+		Sama_2448	0.23	-0.5
2,947,287	-		Sama_2448	0.23	-0.7
2,947,287	-		Sama_2448	0.23	-1.2
2,947,287	-		Sama_2448	0.23	+0.1
2,947,287	-		Sama_2448	0.23	-0.3
2,947,287	-		Sama_2448	0.23	-0.9
2,947,287	-		Sama_2448	0.23	-1.1
2,947,287	-		Sama_2448	0.23	+0.8
2,947,287	-		Sama_2448	0.23	-0.5
2,947,287	-		Sama_2448	0.23	-0.4
2,947,287	-		Sama_2448	0.23	-0.1
2,947,287	-		Sama_2448	0.23	-0.8
2,947,287	-		Sama_2448	0.23	+3.1
2,947,287	-		Sama_2448	0.23	-0.1
2,947,288	+		Sama_2448	0.23	+0.9
2,947,288	+		Sama_2448	0.23	-0.3
2,947,288	+		Sama_2448	0.23	+1.7
2,947,289	-		Sama_2448	0.23	-1.3
2,947,289	-		Sama_2448	0.23	-0.8
2,947,289	-		Sama_2448	0.23	-0.2
2,947,359	+		Sama_2448	0.25	+1.1
2,947,359	+		Sama_2448	0.25	-2.0
2,947,360	-		Sama_2448	0.25	-0.3
2,947,370	-		Sama_2448	0.26	-1.6
2,947,379	+		Sama_2448	0.26	+0.2
2,947,407	+		Sama_2448	0.27	+0.8
2,947,408	-		Sama_2448	0.27	-0.5
2,947,408	-		Sama_2448	0.27	-0.3
2,947,408	-		Sama_2448	0.27	-1.1
2,947,466	-		Sama_2448	0.29	-1.5
2,947,501	+		Sama_2448	0.30	-0.2
2,947,501	+		Sama_2448	0.30	-2.0
2,947,501	+		Sama_2448	0.30	+0.5
2,947,501	+		Sama_2448	0.30	-0.3
2,947,501	+		Sama_2448	0.30	-1.2
2,947,501	+		Sama_2448	0.30	-2.0
2,947,501	+		Sama_2448	0.30	+0.1
2,947,501	+		Sama_2448	0.30	+0.1
2,947,502	-		Sama_2448	0.30	-0.8
2,947,502	-		Sama_2448	0.30	-0.9
2,947,502	-		Sama_2448	0.30	+0.1
2,947,502	-		Sama_2448	0.30	+1.8
2,947,502	-		Sama_2448	0.30	-0.7
2,947,502	-		Sama_2448	0.30	+0.1
2,947,565	+		Sama_2448	0.32	-0.5
2,947,565	+		Sama_2448	0.32	-0.1
2,947,566	-		Sama_2448	0.32	-0.0
2,947,566	-		Sama_2448	0.32	-1.5
2,947,588	+		Sama_2448	0.33	+1.5
2,947,588	+		Sama_2448	0.33	+2.5
2,947,588	+		Sama_2448	0.33	-0.5
2,947,637	+		Sama_2448	0.34	-1.7
2,947,638	-		Sama_2448	0.34	-0.5
2,947,638	-		Sama_2448	0.34	-0.7
2,947,640	+		Sama_2448	0.34	-0.5
2,947,640	+		Sama_2448	0.34	-0.6
2,947,641	-		Sama_2448	0.34	-0.7
2,947,641	-		Sama_2448	0.34	-0.5
2,947,656	+		Sama_2448	0.35	+2.1
2,947,689	+		Sama_2448	0.36	-0.3
2,947,689	+		Sama_2448	0.36	+1.1
2,947,689	+		Sama_2448	0.36	-0.9
2,947,689	+		Sama_2448	0.36	-0.5
2,947,690	-		Sama_2448	0.36	-0.8
2,947,690	-		Sama_2448	0.36	-0.4
2,947,690	-		Sama_2448	0.36	+0.7
2,947,690	-		Sama_2448	0.36	-0.1
2,947,690	-		Sama_2448	0.36	-0.2
2,947,690	-		Sama_2448	0.36	-0.2
2,947,694	+		Sama_2448	0.36	-1.6
2,947,695	-		Sama_2448	0.36	+0.2
2,947,769	+		Sama_2448	0.38	-1.1
2,947,770	-		Sama_2448	0.38	-0.2
2,947,787	+		Sama_2448	0.39	-0.5
2,947,788	-		Sama_2448	0.39	-0.8
2,947,895	-		Sama_2448	0.42	+0.5
2,947,939	+		Sama_2448	0.44	-0.2
2,947,940	-		Sama_2448	0.44	-0.3
2,947,958	+		Sama_2448	0.44	+0.4
2,947,958	+		Sama_2448	0.44	+0.8
2,947,958	+		Sama_2448	0.44	-0.3
2,947,958	+		Sama_2448	0.44	+0.5
2,947,959	-		Sama_2448	0.44	+0.5
2,947,959	-		Sama_2448	0.44	-2.8
2,947,959	-		Sama_2448	0.44	-0.4
2,947,959	-		Sama_2448	0.44	-0.2
2,947,988	+		Sama_2448	0.45	-0.2
2,947,988	+		Sama_2448	0.45	-0.7
2,947,998	+		Sama_2448	0.46	-1.7
2,947,999	-		Sama_2448	0.46	-0.4
2,948,026	+		Sama_2448	0.47	+0.8
2,948,027	-		Sama_2448	0.47	-0.7
2,948,027	-		Sama_2448	0.47	-1.6
2,948,035	+		Sama_2448	0.47	-0.7
2,948,035	+		Sama_2448	0.47	-0.2
2,948,035	+		Sama_2448	0.47	-1.1
2,948,036	-		Sama_2448	0.47	-1.8
2,948,036	-		Sama_2448	0.47	-1.7
2,948,036	-		Sama_2448	0.47	+0.5
2,948,065	+		Sama_2448	0.48	-0.3
2,948,065	+		Sama_2448	0.48	-0.3
2,948,066	-		Sama_2448	0.48	+1.1
2,948,066	-		Sama_2448	0.48	+0.1
2,948,147	-		Sama_2448	0.50	-2.3
2,948,186	+		Sama_2448	0.52	+0.1
2,948,186	+		Sama_2448	0.52	+1.5
2,948,186	+		Sama_2448	0.52	-0.8
2,948,186	+		Sama_2448	0.52	-0.3
2,948,187	-		Sama_2448	0.52	+1.1
2,948,187	-		Sama_2448	0.52	-0.7
2,948,300	+		Sama_2448	0.55	+0.2
2,948,300	+		Sama_2448	0.55	-0.5
2,948,300	+		Sama_2448	0.55	+1.3
2,948,300	+		Sama_2448	0.55	+1.5
2,948,300	+		Sama_2448	0.55	-2.1
2,948,301	-		Sama_2448	0.55	-0.8
2,948,301	-		Sama_2448	0.55	-1.2
2,948,301	-		Sama_2448	0.55	-0.2
2,948,303	-		Sama_2448	0.56	-2.1
2,948,351	+		Sama_2448	0.57	-2.1
2,948,355	-		Sama_2448	0.57	-1.7
2,948,409	+		Sama_2448	0.59	+0.6
2,948,457	-		Sama_2448	0.60	-0.1
2,948,464	+		Sama_2448	0.61	+0.5
2,948,474	+		Sama_2448	0.61	-0.6
2,948,474	+		Sama_2448	0.61	-0.7
2,948,474	+		Sama_2448	0.61	-1.2
2,948,475	-		Sama_2448	0.61	+0.5
2,948,475	-		Sama_2448	0.61	-0.3
2,948,516	+		Sama_2448	0.62	-0.5
2,948,517	-		Sama_2448	0.62	-1.0
2,948,517	-		Sama_2448	0.62	-0.9
2,948,517	-		Sama_2448	0.62	-1.2
2,948,517	-		Sama_2448	0.62	-1.8
2,948,517	-		Sama_2448	0.62	+0.5
2,948,571	-		Sama_2448	0.64	-0.1
2,948,691	+		Sama_2448	0.68	+0.2
2,948,691	+		Sama_2448	0.68	-0.6
2,948,692	-		Sama_2448	0.68	+0.2
2,948,692	-		Sama_2448	0.68	-1.3
2,948,692	-		Sama_2448	0.68	-0.5
2,948,745	-		Sama_2448	0.70	-0.6
2,948,750	+		Sama_2448	0.70	+1.0
2,948,772	+		Sama_2448	0.71	-0.2
2,948,772	+		Sama_2448	0.71	+0.5
2,948,772	+		Sama_2448	0.71	+1.1
2,948,773	-		Sama_2448	0.71	-1.2
2,948,773	-		Sama_2448	0.71	+0.0
2,948,792	+		Sama_2448	0.71	+0.5
2,948,792	+		Sama_2448	0.71	-1.1
2,948,814	-		Sama_2448	0.72	-0.4
2,948,814	-		Sama_2448	0.72	+2.1
2,948,815	+		Sama_2448	0.72	-0.8
2,948,815	+		Sama_2448	0.72	-0.0
2,948,815	+		Sama_2448	0.72	-0.3
2,948,815	+		Sama_2448	0.72	+1.1
2,948,815	+		Sama_2448	0.72	-1.1
2,948,815	+		Sama_2448	0.72	+0.1
2,948,815	+		Sama_2448	0.72	-1.8
2,948,815	+		Sama_2448	0.72	-0.6
2,948,816	-		Sama_2448	0.72	-2.1
2,948,816	-		Sama_2448	0.72	-0.5
2,948,816	-		Sama_2448	0.72	-0.2
2,948,816	-		Sama_2448	0.72	+0.3
2,948,816	-		Sama_2448	0.72	+0.9
2,948,816	-		Sama_2448	0.72	-0.7
2,948,816	-		Sama_2448	0.72	+0.1
2,948,816	-		Sama_2448	0.72	+0.8
2,948,816	-		Sama_2448	0.72	-0.2
2,948,816	-		Sama_2448	0.72	-0.8
2,948,816	-		Sama_2448	0.72	-1.1
2,948,816	-		Sama_2448	0.72	-0.5
2,948,816	-		Sama_2448	0.72	-1.3
2,948,820	+		Sama_2448	0.72	+0.2
2,948,820	+		Sama_2448	0.72	-0.3
2,948,820	+		Sama_2448	0.72	-1.2
2,948,820	+		Sama_2448	0.72	-0.5
2,948,820	+		Sama_2448	0.72	+1.6
2,948,820	+		Sama_2448	0.72	+2.1
2,948,820	+		Sama_2448	0.72	-0.0
2,948,821	-		Sama_2448	0.72	+0.7
2,948,821	-		Sama_2448	0.72	-0.6
2,948,821	-		Sama_2448	0.72	-1.3
2,948,821	-		Sama_2448	0.72	+0.1
2,948,821	-		Sama_2448	0.72	-1.7
2,948,821	-		Sama_2448	0.72	-0.9
2,948,821	-		Sama_2448	0.72	-0.1
2,948,839	+		Sama_2448	0.73	-0.2
2,948,839	+		Sama_2448	0.73	-0.7
2,948,839	+		Sama_2448	0.73	-0.8
2,948,840	-		Sama_2448	0.73	-0.7
2,948,840	-		Sama_2448	0.73	-1.3
2,948,840	-		Sama_2448	0.73	+1.1
2,948,840	-		Sama_2448	0.73	+0.9
2,948,850	-		Sama_2448	0.73	+0.5
2,948,860	+		Sama_2448	0.73	-0.3
2,948,861	-		Sama_2448	0.73	+0.3
2,948,861	-		Sama_2448	0.73	+0.8
2,948,868	+		Sama_2448	0.74	-1.1
2,948,868	+		Sama_2448	0.74	-0.3
2,948,868	+		Sama_2448	0.74	-1.2
2,948,868	+		Sama_2448	0.74	-0.9
2,948,869	-		Sama_2448	0.74	+1.0
2,948,869	-		Sama_2448	0.74	+1.4
2,948,869	-		Sama_2448	0.74	-1.3
2,948,869	-		Sama_2448	0.74	-1.1
2,948,915	+		Sama_2448	0.75	-1.1
2,948,915	+		Sama_2448	0.75	-0.7
2,948,916	-		Sama_2448	0.75	-0.2
2,948,971	+		Sama_2448	0.77	-0.9
2,948,971	+		Sama_2448	0.77	+0.8
2,948,972	-		Sama_2448	0.77	-1.8
2,948,972	-		Sama_2448	0.77	+0.1
2,948,972	-		Sama_2448	0.77	-0.9
2,948,975	+		Sama_2448	0.77	-0.5
2,948,975	+		Sama_2448	0.77	+0.4
2,948,975	+		Sama_2448	0.77	-0.9
2,948,975	+		Sama_2448	0.77	-2.1
2,948,975	+		Sama_2448	0.77	+0.2
2,948,975	+		Sama_2448	0.77	+0.1
2,948,975	+		Sama_2448	0.77	-0.1
2,948,975	+		Sama_2448	0.77	-1.3
2,948,976	-		Sama_2448	0.77	-1.0
2,948,976	-		Sama_2448	0.77	-0.5
2,948,976	-		Sama_2448	0.77	-1.7
2,948,976	-		Sama_2448	0.77	+0.3
2,948,976	-		Sama_2448	0.77	-0.7
2,948,976	-		Sama_2448	0.77	-0.3
2,948,976	-		Sama_2448	0.77	+0.1
2,948,976	-		Sama_2448	0.77	-0.8
2,948,976	-		Sama_2448	0.77	+0.4
2,948,976	-		Sama_2448	0.77	+0.1
2,948,976	-		Sama_2448	0.77	-1.1
2,948,976	-		Sama_2448	0.77	-1.2
2,948,976	-		Sama_2448	0.77	-1.5
2,949,005	+		Sama_2448	0.78	-0.1
2,949,005	+		Sama_2448	0.78	+0.5
2,949,005	+		Sama_2448	0.78	-1.4
2,949,005	+		Sama_2448	0.78	-1.1
2,949,006	-		Sama_2448	0.78	-0.5
2,949,093	+		Sama_2448	0.81	-1.5
2,949,166	-		Sama_2448	0.83	-3.6
2,949,182	+		Sama_2448	0.84	-0.1
2,949,182	+		Sama_2448	0.84	-3.0
2,949,182	+		Sama_2448	0.84	-2.9
2,949,182	+		Sama_2448	0.84	+0.5
2,949,182	+		Sama_2448	0.84	-0.7
2,949,182	+		Sama_2448	0.84	+0.5
2,949,183	-		Sama_2448	0.84	-1.1
2,949,183	-		Sama_2448	0.84	-1.5
2,949,183	-		Sama_2448	0.84	-0.5
2,949,183	-		Sama_2448	0.84	-1.1
2,949,183	-		Sama_2448	0.84	+0.1
2,949,183	-		Sama_2448	0.84	+0.4
2,949,183	-		Sama_2448	0.84	-1.1
2,949,183	-		Sama_2448	0.84	-0.7
2,949,186	+		Sama_2448	0.84	-0.9
2,949,186	+		Sama_2448	0.84	-1.2
2,949,186	+		Sama_2448	0.84	-0.5
2,949,186	+		Sama_2448	0.84	+0.8
2,949,187	-		Sama_2448	0.84	-0.1
2,949,187	-		Sama_2448	0.84	-0.3
2,949,224	+		Sama_2448	0.85	+1.3
2,949,224	+		Sama_2448	0.85	-0.5
2,949,224	+		Sama_2448	0.85	-0.2
2,949,225	-		Sama_2448	0.85	+0.8
2,949,225	-		Sama_2448	0.85	-2.2
2,949,225	-		Sama_2448	0.85	-0.0
2,949,225	-		Sama_2448	0.85	-0.2
2,949,255	-		Sama_2448	0.86	-1.1
2,949,291	+		Sama_2448	0.87	+0.0
2,949,291	+		Sama_2448	0.87	-1.6
2,949,291	+		Sama_2448	0.87	-0.5
2,949,291	+		Sama_2448	0.87	-0.2
2,949,291	+		Sama_2448	0.87	+0.1
2,949,292	-		Sama_2448	0.87	-1.0
2,949,292	-		Sama_2448	0.87	-2.6
2,949,292	-		Sama_2448	0.87	+0.3
2,949,292	-		Sama_2448	0.87	+1.1
2,949,292	-		Sama_2448	0.87	-0.7
2,949,297	+		Sama_2448	0.87	-0.9
2,949,298	-		Sama_2448	0.87	+0.4
2,949,298	-		Sama_2448	0.87	-0.2
2,949,298	-		Sama_2448	0.87	+0.1
2,949,393	-				-0.5
2,949,403	+				-1.2
2,949,403	+				-0.3
2,949,404	-				+0.1
2,949,404	-				-0.2
2,949,404	-				-0.7
2,949,404	-				-0.7
2,949,493	+				-1.2
2,949,493	+				+0.8
2,949,493	+				+1.1
2,949,493	+				-0.2
2,949,493	+				-1.1
2,949,494	-				-0.4
2,949,494	-				+0.5
2,949,494	-				+0.3
2,949,494	-				-0.5
2,949,620	-				-1.2
2,949,625	+				+0.3
2,949,625	+				+0.2
2,949,639	+				-1.3
2,949,697	+				+0.1
2,949,697	+				-0.9
2,949,698	-				-1.6
2,949,698	-				-1.2
2,949,715	+				-0.7
2,949,745	+				-0.2
2,949,745	+				-1.2
2,949,746	-				+0.5
2,949,756	+				+0.1
2,949,756	+				-2.4
2,949,768	+				+3.1
2,949,769	-				+1.5
2,949,782	+				+0.5
2,949,782	+				+1.8
2,949,782	+				-1.3
2,949,783	-				+0.1
2,949,798	+				-0.7
2,949,798	+				+0.9
2,949,798	+				+0.2
2,949,799	-				+0.8
2,949,799	-				-0.9
2,949,799	-				-1.7
2,949,799	-				-1.2
2,949,799	-				-0.7
2,949,799	-				-2.1
2,949,809	+				+0.3
2,949,834	+				-0.4
2,949,834	+				+0.5
2,949,835	-				+0.5
2,949,835	-				+0.6
2,949,835	-				+0.4
2,949,860	-				-0.2
2,949,927	+				-0.9
2,949,927	+				-0.2
2,949,928	-				+2.1
2,949,928	-				-1.1
2,949,937	+				+0.3
2,949,937	+				-0.1
2,949,938	-				+0.5
2,949,938	-				+1.4
2,950,180	+		Sama_2449	0.24	-1.7
2,950,181	-		Sama_2449	0.24	+2.1
2,950,286	+		Sama_2449	0.30	+1.4
2,950,286	+		Sama_2449	0.30	-0.5
2,950,287	-		Sama_2449	0.30	-1.1
2,950,287	-		Sama_2449	0.30	-0.2
2,950,287	-		Sama_2449	0.30	-0.2
2,950,438	+		Sama_2449	0.40	+0.9
2,950,508	+		Sama_2449	0.44	-1.1
2,950,508	+		Sama_2449	0.44	+0.4
2,950,508	+		Sama_2449	0.44	-0.7
2,950,509	-		Sama_2449	0.44	-1.2
2,950,509	-		Sama_2449	0.44	+0.0
2,950,530	+		Sama_2449	0.46	-0.8
2,950,531	-		Sama_2449	0.46	-0.8
2,950,583	-		Sama_2449	0.49	-0.6
2,950,656	+		Sama_2449	0.53	+0.7
2,950,656	+		Sama_2449	0.53	-0.9
2,950,657	-		Sama_2449	0.53	+0.1