Strain Fitness in Shewanella amazonensis SB2B around Sama_1198

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,467,468	-				+1.1
1,467,526	+		Sama_1197	0.10	+1.4
1,467,640	-		Sama_1197	0.22	+0.6
1,467,658	-		Sama_1197	0.24	+0.2
1,467,785	+		Sama_1197	0.36	+1.1
1,467,785	+		Sama_1197	0.36	-1.0
1,467,786	-		Sama_1197	0.36	-1.0
1,467,870	+		Sama_1197	0.45	+1.8
1,467,870	+		Sama_1197	0.45	+1.9
1,467,870	+		Sama_1197	0.45	+0.7
1,467,871	-		Sama_1197	0.45	+0.3
1,467,871	-		Sama_1197	0.45	-0.2
1,467,924	+		Sama_1197	0.50	-0.4
1,467,924	+		Sama_1197	0.50	+1.3
1,468,009	+		Sama_1197	0.58	+2.1
1,468,009	+		Sama_1197	0.58	+2.1
1,468,009	+		Sama_1197	0.58	+2.8
1,468,009	+		Sama_1197	0.58	+3.7
1,468,009	+		Sama_1197	0.58	+1.1
1,468,009	+		Sama_1197	0.58	+3.1
1,468,010	-		Sama_1197	0.58	-1.0
1,468,010	-		Sama_1197	0.58	-0.0
1,468,010	-		Sama_1197	0.58	-0.2
1,468,010	-		Sama_1197	0.58	-0.2
1,468,010	-		Sama_1197	0.58	-0.4
1,468,010	-		Sama_1197	0.58	+2.1
1,468,010	-		Sama_1197	0.58	-1.3
1,468,069	+		Sama_1197	0.64	+3.0
1,468,069	+		Sama_1197	0.64	+2.8
1,468,069	+		Sama_1197	0.64	+3.3
1,468,069	+		Sama_1197	0.64	+3.4
1,468,069	+		Sama_1197	0.64	+1.5
1,468,069	+		Sama_1197	0.64	+3.3
1,468,069	+		Sama_1197	0.64	+2.3
1,468,069	+		Sama_1197	0.64	+3.5
1,468,069	+		Sama_1197	0.64	+3.0
1,468,069	+		Sama_1197	0.64	+3.5
1,468,069	+		Sama_1197	0.64	+2.7
1,468,069	+		Sama_1197	0.64	+2.8
1,468,070	-		Sama_1197	0.64	-0.1
1,468,070	-		Sama_1197	0.64	-0.7
1,468,070	-		Sama_1197	0.64	-1.7
1,468,070	-		Sama_1197	0.64	+0.9
1,468,070	-		Sama_1197	0.64	+1.7
1,468,070	-		Sama_1197	0.64	+0.6
1,468,070	-		Sama_1197	0.64	-1.3
1,468,070	-		Sama_1197	0.64	-1.4
1,468,070	-		Sama_1197	0.64	-0.2
1,468,070	-		Sama_1197	0.64	-1.0
1,468,129	+		Sama_1197	0.70	+5.1
1,468,129	+		Sama_1197	0.70	+2.6
1,468,129	+		Sama_1197	0.70	+3.5
1,468,129	+		Sama_1197	0.70	+4.9
1,468,129	+		Sama_1197	0.70	+2.6
1,468,129	+		Sama_1197	0.70	+2.2
1,468,130	-		Sama_1197	0.70	+0.2
1,468,130	-		Sama_1197	0.70	-0.4
1,468,130	-		Sama_1197	0.70	-0.9
1,468,130	-		Sama_1197	0.70	+0.1
1,468,130	-		Sama_1197	0.70	-0.2
1,468,130	-		Sama_1197	0.70	-1.4
1,468,130	-		Sama_1197	0.70	+0.8
1,468,130	-		Sama_1197	0.70	+1.0
1,468,130	-		Sama_1197	0.70	+1.0
1,468,131	+		Sama_1197	0.70	+3.5
1,468,131	+		Sama_1197	0.70	+2.9
1,468,131	+		Sama_1197	0.70	+1.4
1,468,131	+		Sama_1197	0.70	+2.0
1,468,131	+		Sama_1197	0.70	+2.2
1,468,132	-		Sama_1197	0.71	-1.5
1,468,132	-		Sama_1197	0.71	-0.7
1,468,132	-		Sama_1197	0.71	+0.1
1,468,132	-		Sama_1197	0.71	+0.1
1,468,132	-		Sama_1197	0.71	+1.1
1,468,132	-		Sama_1197	0.71	-0.1
1,468,132	-		Sama_1197	0.71	-0.2
1,468,206	+		Sama_1197	0.78	+2.2
1,468,206	+		Sama_1197	0.78	+1.3
1,468,210	+		Sama_1197	0.78	+1.0
1,468,363	+				+3.0
1,468,363	+				+3.1
1,468,385	+				+4.0
1,468,431	+				+2.6
1,468,431	+				+4.0
1,468,431	+				+0.8
1,468,431	+				+2.7
1,468,431	+				+2.7
1,468,431	+				+3.4
1,468,431	+				+5.8
1,468,431	+				+2.5
1,468,431	+				+2.3
1,468,431	+				+0.9
1,468,432	-				-1.0
1,468,432	-				+0.7
1,468,432	-				+1.4
1,468,432	-				+0.1
1,468,432	-				-0.9
1,468,432	-				+0.3
1,468,435	+				+2.6
1,468,435	+				+1.3
1,468,435	+				+1.1
1,468,435	+				+1.8
1,468,436	-				-0.2
1,468,436	-				-1.0
1,468,489	-				-1.0
1,468,489	-				+0.1
1,468,548	+		Sama_1198	0.10	+2.5
1,468,548	+		Sama_1198	0.10	+4.4
1,468,549	-		Sama_1198	0.10	-1.5
1,468,572	+		Sama_1198	0.12	+2.9
1,468,603	+		Sama_1198	0.15	+4.0
1,468,621	-		Sama_1198	0.16	-0.9
1,468,675	+		Sama_1198	0.21	+3.5
1,468,723	+		Sama_1198	0.24	+1.3
1,468,724	-		Sama_1198	0.25	+1.1
1,468,735	+		Sama_1198	0.25	+3.8
1,468,783	-		Sama_1198	0.29	-0.5
1,468,785	+		Sama_1198	0.29	+5.3
1,468,927	+		Sama_1198	0.41	+6.5
1,468,927	+		Sama_1198	0.41	+7.2
1,468,927	+		Sama_1198	0.41	+5.6
1,468,961	+		Sama_1198	0.44	+6.2
1,469,146	+		Sama_1198	0.59	+7.2
1,469,146	+		Sama_1198	0.59	+7.9
1,469,216	+		Sama_1198	0.64	+7.1
1,469,216	+		Sama_1198	0.64	+7.1
1,469,216	+		Sama_1198	0.64	+7.3
1,469,216	+		Sama_1198	0.64	+6.7
1,469,217	-		Sama_1198	0.64	+0.6
1,469,217	-		Sama_1198	0.64	+1.3
1,469,217	-		Sama_1198	0.64	-0.9
1,469,227	+		Sama_1198	0.65	+6.6
1,469,538	+				+9.3
1,469,538	+				+8.0
1,469,538	+				+7.2
1,469,595	-				+1.0
1,469,654	+				+7.6
1,469,667	-				-0.6
1,469,686	+				+5.7
1,469,686	+				+6.2
1,469,880	+		Sama_1199	0.12	+2.1
1,469,880	+		Sama_1199	0.12	-1.9
1,469,880	+		Sama_1199	0.12	-0.9
1,469,880	+		Sama_1199	0.12	-0.2
1,469,880	+		Sama_1199	0.12	-1.3
1,469,880	+		Sama_1199	0.12	-1.8
1,469,881	-		Sama_1199	0.12	-0.4
1,469,881	-		Sama_1199	0.12	+0.1
1,469,881	-		Sama_1199	0.12	-0.1
1,469,881	-		Sama_1199	0.12	-1.6
1,469,882	+		Sama_1199	0.12	+0.6
1,469,883	-		Sama_1199	0.12	+0.8
1,469,883	-		Sama_1199	0.12	-1.0
1,469,883	-		Sama_1199	0.12	-1.0
1,469,883	-		Sama_1199	0.12	+0.2
1,469,901	+		Sama_1199	0.13	+0.3
1,469,902	-		Sama_1199	0.14	-0.2
1,469,902	-		Sama_1199	0.14	-1.6
1,469,958	+		Sama_1199	0.18	-1.0
1,470,010	+		Sama_1199	0.22	-0.0
1,470,010	+		Sama_1199	0.22	-0.2
1,470,010	+		Sama_1199	0.22	-1.4
1,470,010	+		Sama_1199	0.22	-0.1
1,470,011	-		Sama_1199	0.22	-1.5
1,470,011	-		Sama_1199	0.22	+0.6
1,470,084	-		Sama_1199	0.27	-0.9
1,470,084	-		Sama_1199	0.27	-1.0
1,470,084	-		Sama_1199	0.27	-1.4
1,470,111	+		Sama_1199	0.29	-0.9
1,470,111	+		Sama_1199	0.29	-1.9
1,470,112	-		Sama_1199	0.29	+0.6
1,470,112	-		Sama_1199	0.29	-1.6
1,470,115	+		Sama_1199	0.30	-0.5
1,470,115	+		Sama_1199	0.30	-0.7
1,470,115	+		Sama_1199	0.30	-0.9
1,470,115	+		Sama_1199	0.30	-2.4
1,470,115	+		Sama_1199	0.30	-1.0
1,470,116	-		Sama_1199	0.30	-0.3
1,470,116	-		Sama_1199	0.30	+1.0
1,470,116	-		Sama_1199	0.30	-1.6
1,470,161	+		Sama_1199	0.33	-0.4
1,470,161	+		Sama_1199	0.33	-0.2
1,470,162	-		Sama_1199	0.33	-0.7
1,470,162	-		Sama_1199	0.33	-0.3
1,470,240	+		Sama_1199	0.39	-1.2
1,470,241	-		Sama_1199	0.39	-1.8
1,470,241	-		Sama_1199	0.39	-0.4
1,470,324	+		Sama_1199	0.46	-2.0
1,470,324	+		Sama_1199	0.46	-0.4
1,470,324	+		Sama_1199	0.46	+0.1
1,470,325	-		Sama_1199	0.46	-0.4
1,470,364	-		Sama_1199	0.49	+2.7
1,470,447	+		Sama_1199	0.55	-1.4
1,470,486	+		Sama_1199	0.58	-1.8
1,470,486	+		Sama_1199	0.58	+0.3
1,470,487	-		Sama_1199	0.58	-1.2
1,470,487	-		Sama_1199	0.58	+0.8
1,470,487	-		Sama_1199	0.58	-0.6
1,470,518	+		Sama_1199	0.60	-1.0
1,470,518	+		Sama_1199	0.60	-0.7
1,470,519	-		Sama_1199	0.60	-1.0
1,470,519	-		Sama_1199	0.60	+0.0
1,470,528	+		Sama_1199	0.61	-1.4
1,470,529	-		Sama_1199	0.61	+0.1
1,470,562	+		Sama_1199	0.64	+0.3
1,470,573	+		Sama_1199	0.64	-0.2
1,470,573	+		Sama_1199	0.64	+1.1
1,470,573	+		Sama_1199	0.64	+0.9
1,470,574	-		Sama_1199	0.65	+0.8
1,470,574	-		Sama_1199	0.65	-0.2
1,470,574	-		Sama_1199	0.65	+0.4
1,470,600	+		Sama_1199	0.67	+0.4
1,470,600	+		Sama_1199	0.67	+0.8