Strain Fitness in Shewanella amazonensis SB2B around Sama_1197

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,466,461	+		Sama_1196	0.20	+0.7
1,466,461	+		Sama_1196	0.20	+1.1
1,466,461	+		Sama_1196	0.20	+2.1
1,466,566	+		Sama_1196	0.29	+1.1
1,466,567	-		Sama_1196	0.29	+0.3
1,466,567	-		Sama_1196	0.29	-0.3
1,466,567	-		Sama_1196	0.29	-1.6
1,466,567	-		Sama_1196	0.29	+1.1
1,466,675	-		Sama_1196	0.38	-2.9
1,466,694	+		Sama_1196	0.39	+1.5
1,466,694	+		Sama_1196	0.39	+1.6
1,466,695	-		Sama_1196	0.39	-0.7
1,466,815	+		Sama_1196	0.49	+1.9
1,466,815	+		Sama_1196	0.49	+1.0
1,466,816	-		Sama_1196	0.50	-0.2
1,466,816	-		Sama_1196	0.50	+0.0
1,466,848	+		Sama_1196	0.52	+1.5
1,466,848	+		Sama_1196	0.52	+1.3
1,466,849	-		Sama_1196	0.52	-0.7
1,466,849	-		Sama_1196	0.52	-0.3
1,466,849	-		Sama_1196	0.52	-1.7
1,466,930	+		Sama_1196	0.59	+3.1
1,466,930	+		Sama_1196	0.59	+1.6
1,466,930	+		Sama_1196	0.59	+2.9
1,466,931	-		Sama_1196	0.59	+1.1
1,466,931	-		Sama_1196	0.59	+1.4
1,466,931	-		Sama_1196	0.59	-0.4
1,466,931	-		Sama_1196	0.59	+1.0
1,466,948	+		Sama_1196	0.61	+0.7
1,466,949	-		Sama_1196	0.61	+1.3
1,466,964	+		Sama_1196	0.62	+1.3
1,467,124	+		Sama_1196	0.75	+4.3
1,467,124	+		Sama_1196	0.75	+3.2
1,467,124	+		Sama_1196	0.75	+4.0
1,467,137	-		Sama_1196	0.76	+0.4
1,467,137	-		Sama_1196	0.76	-2.7
1,467,252	+		Sama_1196	0.86	+2.0
1,467,252	+		Sama_1196	0.86	+1.7
1,467,262	+		Sama_1196	0.87	+3.7
1,467,262	+		Sama_1196	0.87	+2.0
1,467,262	+		Sama_1196	0.87	+1.4
1,467,262	+		Sama_1196	0.87	+1.3
1,467,262	+		Sama_1196	0.87	+1.9
1,467,262	+		Sama_1196	0.87	+0.6
1,467,262	+		Sama_1196	0.87	+0.9
1,467,262	+		Sama_1196	0.87	+0.7
1,467,262	+		Sama_1196	0.87	+2.0
1,467,262	+		Sama_1196	0.87	+1.9
1,467,263	-		Sama_1196	0.87	+0.3
1,467,263	-		Sama_1196	0.87	+2.1
1,467,263	-		Sama_1196	0.87	-0.8
1,467,263	-		Sama_1196	0.87	-1.6
1,467,263	-		Sama_1196	0.87	+0.7
1,467,263	-		Sama_1196	0.87	+0.3
1,467,263	-		Sama_1196	0.87	-2.0
1,467,263	-		Sama_1196	0.87	+0.8
1,467,263	-		Sama_1196	0.87	+1.7
1,467,263	-		Sama_1196	0.87	+0.7
1,467,264	+		Sama_1196	0.87	+2.5
1,467,271	+		Sama_1196	0.88	+6.2
1,467,271	+		Sama_1196	0.88	+6.6
1,467,271	+		Sama_1196	0.88	+7.1
1,467,272	-		Sama_1196	0.88	-0.2
1,467,391	+				+5.3
1,467,416	-				+0.7
1,467,416	-				+0.1
1,467,468	-				+1.1
1,467,526	+		Sama_1197	0.10	+1.4
1,467,640	-		Sama_1197	0.22	+0.6
1,467,658	-		Sama_1197	0.24	+0.2
1,467,785	+		Sama_1197	0.36	+1.1
1,467,785	+		Sama_1197	0.36	-1.0
1,467,786	-		Sama_1197	0.36	-1.0
1,467,870	+		Sama_1197	0.45	+1.8
1,467,870	+		Sama_1197	0.45	+1.9
1,467,870	+		Sama_1197	0.45	+0.7
1,467,871	-		Sama_1197	0.45	+0.3
1,467,871	-		Sama_1197	0.45	-0.2
1,467,924	+		Sama_1197	0.50	-0.4
1,467,924	+		Sama_1197	0.50	+1.3
1,468,009	+		Sama_1197	0.58	+2.1
1,468,009	+		Sama_1197	0.58	+2.1
1,468,009	+		Sama_1197	0.58	+2.8
1,468,009	+		Sama_1197	0.58	+3.7
1,468,009	+		Sama_1197	0.58	+1.1
1,468,009	+		Sama_1197	0.58	+3.1
1,468,010	-		Sama_1197	0.58	-1.0
1,468,010	-		Sama_1197	0.58	-0.0
1,468,010	-		Sama_1197	0.58	-0.2
1,468,010	-		Sama_1197	0.58	-0.2
1,468,010	-		Sama_1197	0.58	-0.4
1,468,010	-		Sama_1197	0.58	+2.1
1,468,010	-		Sama_1197	0.58	-1.3
1,468,069	+		Sama_1197	0.64	+3.0
1,468,069	+		Sama_1197	0.64	+2.8
1,468,069	+		Sama_1197	0.64	+3.3
1,468,069	+		Sama_1197	0.64	+3.4
1,468,069	+		Sama_1197	0.64	+1.5
1,468,069	+		Sama_1197	0.64	+3.3
1,468,069	+		Sama_1197	0.64	+2.3
1,468,069	+		Sama_1197	0.64	+3.5
1,468,069	+		Sama_1197	0.64	+3.0
1,468,069	+		Sama_1197	0.64	+3.5
1,468,069	+		Sama_1197	0.64	+2.7
1,468,069	+		Sama_1197	0.64	+2.8
1,468,070	-		Sama_1197	0.64	-0.1
1,468,070	-		Sama_1197	0.64	-0.7
1,468,070	-		Sama_1197	0.64	-1.7
1,468,070	-		Sama_1197	0.64	+0.9
1,468,070	-		Sama_1197	0.64	+1.7
1,468,070	-		Sama_1197	0.64	+0.6
1,468,070	-		Sama_1197	0.64	-1.3
1,468,070	-		Sama_1197	0.64	-1.4
1,468,070	-		Sama_1197	0.64	-0.2
1,468,070	-		Sama_1197	0.64	-1.0
1,468,129	+		Sama_1197	0.70	+5.1
1,468,129	+		Sama_1197	0.70	+2.6
1,468,129	+		Sama_1197	0.70	+3.5
1,468,129	+		Sama_1197	0.70	+4.9
1,468,129	+		Sama_1197	0.70	+2.6
1,468,129	+		Sama_1197	0.70	+2.2
1,468,130	-		Sama_1197	0.70	+0.2
1,468,130	-		Sama_1197	0.70	-0.4
1,468,130	-		Sama_1197	0.70	-0.9
1,468,130	-		Sama_1197	0.70	+0.1
1,468,130	-		Sama_1197	0.70	-0.2
1,468,130	-		Sama_1197	0.70	-1.4
1,468,130	-		Sama_1197	0.70	+0.8
1,468,130	-		Sama_1197	0.70	+1.0
1,468,130	-		Sama_1197	0.70	+1.0
1,468,131	+		Sama_1197	0.70	+3.5
1,468,131	+		Sama_1197	0.70	+2.9
1,468,131	+		Sama_1197	0.70	+1.4
1,468,131	+		Sama_1197	0.70	+2.0
1,468,131	+		Sama_1197	0.70	+2.2
1,468,132	-		Sama_1197	0.71	-1.5
1,468,132	-		Sama_1197	0.71	-0.7
1,468,132	-		Sama_1197	0.71	+0.1
1,468,132	-		Sama_1197	0.71	+0.1
1,468,132	-		Sama_1197	0.71	+1.1
1,468,132	-		Sama_1197	0.71	-0.1
1,468,132	-		Sama_1197	0.71	-0.2
1,468,206	+		Sama_1197	0.78	+2.2
1,468,206	+		Sama_1197	0.78	+1.3
1,468,210	+		Sama_1197	0.78	+1.0
1,468,363	+				+3.0
1,468,363	+				+3.1
1,468,385	+				+4.0
1,468,431	+				+2.6
1,468,431	+				+4.0
1,468,431	+				+0.8
1,468,431	+				+2.7
1,468,431	+				+2.7
1,468,431	+				+3.4
1,468,431	+				+5.8
1,468,431	+				+2.5
1,468,431	+				+2.3
1,468,431	+				+0.9
1,468,432	-				-1.0
1,468,432	-				+0.7
1,468,432	-				+1.4
1,468,432	-				+0.1
1,468,432	-				-0.9
1,468,432	-				+0.3
1,468,435	+				+2.6
1,468,435	+				+1.3
1,468,435	+				+1.1
1,468,435	+				+1.8
1,468,436	-				-0.2
1,468,436	-				-1.0
1,468,489	-				-1.0
1,468,489	-				+0.1
1,468,548	+		Sama_1198	0.10	+2.5
1,468,548	+		Sama_1198	0.10	+4.4
1,468,549	-		Sama_1198	0.10	-1.5
1,468,572	+		Sama_1198	0.12	+2.9
1,468,603	+		Sama_1198	0.15	+4.0
1,468,621	-		Sama_1198	0.16	-0.9
1,468,675	+		Sama_1198	0.21	+3.5
1,468,723	+		Sama_1198	0.24	+1.3
1,468,724	-		Sama_1198	0.25	+1.1
1,468,735	+		Sama_1198	0.25	+3.8
1,468,783	-		Sama_1198	0.29	-0.5
1,468,785	+		Sama_1198	0.29	+5.3
1,468,927	+		Sama_1198	0.41	+6.5
1,468,927	+		Sama_1198	0.41	+7.2
1,468,927	+		Sama_1198	0.41	+5.6
1,468,961	+		Sama_1198	0.44	+6.2
1,469,146	+		Sama_1198	0.59	+7.2
1,469,146	+		Sama_1198	0.59	+7.9
1,469,216	+		Sama_1198	0.64	+7.1
1,469,216	+		Sama_1198	0.64	+7.1
1,469,216	+		Sama_1198	0.64	+7.3
1,469,216	+		Sama_1198	0.64	+6.7
1,469,217	-		Sama_1198	0.64	+0.6
1,469,217	-		Sama_1198	0.64	+1.3
1,469,217	-		Sama_1198	0.64	-0.9
1,469,227	+		Sama_1198	0.65	+6.6