Strain Fitness in Shewanella amazonensis SB2B around Sama_0944

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,142,655	+		Sama_0943	0.72	-0.9
1,142,683	-		Sama_0943	0.73	+1.6
1,142,698	+		Sama_0943	0.74	-0.0
1,142,699	-		Sama_0943	0.74	-0.0
1,142,699	-		Sama_0943	0.74	+0.5
1,142,699	-		Sama_0943	0.74	+0.3
1,142,713	+		Sama_0943	0.74	-0.7
1,142,714	-		Sama_0943	0.74	-0.7
1,142,714	-		Sama_0943	0.74	-0.3
1,142,740	+		Sama_0943	0.75	+0.3
1,142,741	-		Sama_0943	0.75	-0.3
1,142,743	+		Sama_0943	0.75	-0.8
1,142,743	+		Sama_0943	0.75	-1.0
1,142,744	-		Sama_0943	0.75	+0.3
1,142,744	-		Sama_0943	0.75	-1.3
1,142,787	+		Sama_0943	0.77	-0.6
1,142,830	-		Sama_0943	0.79	-1.9
1,142,830	-		Sama_0943	0.79	+0.7
1,142,901	+		Sama_0943	0.81	-0.3
1,142,901	+		Sama_0943	0.81	-1.6
1,142,901	+		Sama_0943	0.81	-0.2
1,142,901	+		Sama_0943	0.81	+0.3
1,142,901	+		Sama_0943	0.81	-1.7
1,142,902	-		Sama_0943	0.81	+1.0
1,142,902	-		Sama_0943	0.81	-2.5
1,142,914	-		Sama_0943	0.82	-1.0
1,142,923	+		Sama_0943	0.82	-1.1
1,142,923	+		Sama_0943	0.82	+0.6
1,142,923	+		Sama_0943	0.82	+0.7
1,142,923	+		Sama_0943	0.82	-0.3
1,142,923	+		Sama_0943	0.82	-0.3
1,142,923	+		Sama_0943	0.82	-0.5
1,142,924	-		Sama_0943	0.82	-1.7
1,142,924	-		Sama_0943	0.82	-0.7
1,142,924	-		Sama_0943	0.82	+1.3
1,142,924	-		Sama_0943	0.82	+0.2
1,142,924	-		Sama_0943	0.82	+0.8
1,142,980	+		Sama_0943	0.84	+0.5
1,142,980	+		Sama_0943	0.84	+0.3
1,142,980	+		Sama_0943	0.84	+0.3
1,142,980	+		Sama_0943	0.84	-0.3
1,142,980	+		Sama_0943	0.84	-0.3
1,142,981	-		Sama_0943	0.84	+1.3
1,142,981	-		Sama_0943	0.84	-0.6
1,142,981	-		Sama_0943	0.84	-0.1
1,142,981	-		Sama_0943	0.84	+0.7
1,142,981	-		Sama_0943	0.84	+0.6
1,142,981	-		Sama_0943	0.84	-0.9
1,143,044	+		Sama_0943	0.87	+1.1
1,143,045	-		Sama_0943	0.87	+1.0
1,143,045	-		Sama_0943	0.87	-0.3
1,143,049	+		Sama_0943	0.87	-1.3
1,143,049	+		Sama_0943	0.87	+1.3
1,143,050	-		Sama_0943	0.87	-2.0
1,143,050	-		Sama_0943	0.87	+1.9
1,143,070	+		Sama_0943	0.88	-1.2
1,143,070	+		Sama_0943	0.88	+1.7
1,143,071	-		Sama_0943	0.88	-1.0
1,143,071	-		Sama_0943	0.88	+0.9
1,143,072	+		Sama_0943	0.88	+0.6
1,143,231	+				+1.3
1,143,231	+				-0.6
1,143,231	+				+1.5
1,143,231	+				-1.8
1,143,231	+				-0.8
1,143,231	+				-1.3
1,143,231	+				-0.4
1,143,231	+				-0.5
1,143,231	+				+1.6
1,143,231	+				-1.0
1,143,232	-				-0.8
1,143,232	-				-0.3
1,143,232	-				-2.2
1,143,232	-				-0.3
1,143,232	-				-0.9
1,143,232	-				-1.1
1,143,232	-				+0.7
1,143,274	+				-1.9
1,143,274	+				+1.0
1,143,304	+				+0.3
1,143,304	+				+0.6
1,143,304	+				-0.9
1,143,304	+				-1.3
1,143,304	+				-0.9
1,143,304	+				-0.1
1,143,305	-				+1.1
1,143,305	-				+2.3
1,143,317	+				-1.3
1,143,332	+				-0.5
1,143,351	+				+0.1
1,143,352	-				+0.8
1,143,352	-				+0.1
1,143,372	+				-1.7
1,143,397	+				+0.8
1,143,398	-				+0.4
1,143,408	+				-0.3
1,143,539	+				-0.2
1,143,550	+				-0.2
1,143,555	+				-0.3
1,143,567	-				+0.0
1,143,653	-				-0.2
1,143,653	-				-1.0
1,143,660	+				+0.7
1,143,662	+				-0.4
1,143,662	+				-0.5
1,143,662	+				-0.4
1,143,662	+				+0.9
1,143,662	+				-0.3
1,143,662	+				-1.5
1,143,662	+				-0.3
1,143,662	+				-0.3
1,143,662	+				+0.4
1,143,662	+				-1.2
1,143,663	-				+1.3
1,143,663	-				+0.4
1,143,663	-				+1.6
1,143,663	-				+0.3
1,143,663	-				-0.7
1,143,663	-				-0.0
1,143,663	-				-1.5
1,143,663	-				+3.9
1,143,679	-				+0.3
1,143,679	-				+4.3
1,143,697	+				-0.2
1,143,697	+				+0.3
1,143,697	+				+0.6
1,143,697	+				-0.2
1,143,697	+				-0.2
1,143,899	+		Sama_0944	0.31	-0.4
1,143,899	+		Sama_0944	0.31	-0.3
1,143,900	-		Sama_0944	0.31	-0.3
1,143,931	+		Sama_0944	0.34	+1.9
1,143,931	+		Sama_0944	0.34	+0.5
1,143,931	+		Sama_0944	0.34	-2.2
1,143,931	+		Sama_0944	0.34	+0.4
1,143,931	+		Sama_0944	0.34	+1.3
1,143,931	+		Sama_0944	0.34	+0.0
1,143,931	+		Sama_0944	0.34	+0.3
1,143,932	-		Sama_0944	0.35	+2.0
1,143,932	-		Sama_0944	0.35	+0.5
1,143,932	-		Sama_0944	0.35	+1.0
1,143,932	-		Sama_0944	0.35	+0.6
1,143,932	-		Sama_0944	0.35	-1.0
1,143,932	-		Sama_0944	0.35	-0.7
1,143,932	-		Sama_0944	0.35	+0.3
1,143,947	+		Sama_0944	0.36	+0.9
1,143,947	+		Sama_0944	0.36	+1.0
1,143,947	+		Sama_0944	0.36	+0.9
1,143,948	-		Sama_0944	0.36	-0.4
1,143,948	-		Sama_0944	0.36	-0.9
1,143,948	-		Sama_0944	0.36	-0.2
1,144,021	+		Sama_0944	0.44	-2.2
1,144,021	+		Sama_0944	0.44	-0.2
1,144,021	+		Sama_0944	0.44	+0.7
1,144,021	+		Sama_0944	0.44	+3.3
1,144,047	+		Sama_0944	0.47	+2.3
1,144,127	+		Sama_0944	0.56	-0.8
1,144,127	+		Sama_0944	0.56	+0.3
1,144,127	+		Sama_0944	0.56	+0.4
1,144,127	+		Sama_0944	0.56	+1.8
1,144,128	-		Sama_0944	0.56	+0.9
1,144,246	+		Sama_0944	0.69	-0.3
1,144,330	+		Sama_0944	0.78	-0.0
1,144,330	+		Sama_0944	0.78	+0.3
1,144,330	+		Sama_0944	0.78	+1.5
1,144,331	-		Sama_0944	0.79	-0.0
1,144,360	-		Sama_0944	0.82	+1.2
1,144,491	+				-0.0
1,144,503	+				+0.6
1,144,503	+				-0.3
1,144,503	+				+0.1
1,144,503	+				-1.5
1,144,504	-				-0.5
1,144,504	-				+0.2
1,144,504	-				-1.3
1,144,504	-				-0.3
1,144,538	-				+1.1
1,144,543	+				-0.0
1,144,543	+				+0.1
1,144,544	-				+0.2
1,144,544	-				-2.6
1,144,556	+				+1.3
1,144,556	+				-0.4
1,144,556	+				-0.3
1,144,557	-				+0.3
1,144,557	-				+0.3
1,144,557	-				-1.0
1,144,557	-				-1.4
1,144,557	-				+1.0
1,144,577	+				-0.5
1,144,578	-				-0.4
1,144,682	+		Sama_0945	0.11	-0.0
1,144,683	-		Sama_0945	0.11	-1.0
1,144,736	-		Sama_0945	0.17	+2.3
1,144,746	+		Sama_0945	0.18	-0.8
1,144,746	+		Sama_0945	0.18	+1.7
1,144,746	+		Sama_0945	0.18	-1.8
1,144,746	+		Sama_0945	0.18	-0.4
1,144,747	-		Sama_0945	0.18	+2.9
1,144,747	-		Sama_0945	0.18	+0.5
1,144,775	+		Sama_0945	0.21	-0.8
1,144,775	+		Sama_0945	0.21	+0.2
1,144,775	+		Sama_0945	0.21	-0.6
1,144,775	+		Sama_0945	0.21	-0.6
1,144,776	-		Sama_0945	0.21	-1.5
1,144,776	-		Sama_0945	0.21	-0.5
1,144,776	-		Sama_0945	0.21	+0.5
1,144,809	+		Sama_0945	0.24	+0.5
1,144,815	-		Sama_0945	0.25	+0.2
1,144,815	-		Sama_0945	0.25	-1.2
1,144,815	-		Sama_0945	0.25	+1.3
1,144,878	-		Sama_0945	0.31	+1.1
1,144,878	-		Sama_0945	0.31	-0.3
1,144,963	+		Sama_0945	0.39	+0.2
1,144,963	+		Sama_0945	0.39	+0.7
1,144,963	+		Sama_0945	0.39	-0.7
1,144,963	+		Sama_0945	0.39	+0.7
1,144,963	+		Sama_0945	0.39	-0.0
1,144,963	+		Sama_0945	0.39	-0.7
1,144,963	+		Sama_0945	0.39	+0.3
1,144,963	+		Sama_0945	0.39	+0.6
1,144,963	+		Sama_0945	0.39	+1.3
1,144,963	+		Sama_0945	0.39	+0.2
1,144,964	-		Sama_0945	0.40	-0.5
1,144,964	-		Sama_0945	0.40	-1.9
1,144,964	-		Sama_0945	0.40	+1.3
1,144,964	-		Sama_0945	0.40	-0.7
1,144,964	-		Sama_0945	0.40	-0.9
1,144,964	-		Sama_0945	0.40	-0.2
1,144,965	+		Sama_0945	0.40	-0.3
1,144,966	+		Sama_0945	0.40	+0.2
1,144,966	+		Sama_0945	0.40	+0.1
1,144,966	+		Sama_0945	0.40	-0.5
1,144,966	+		Sama_0945	0.40	-0.9
1,144,966	+		Sama_0945	0.40	-0.8
1,144,966	+		Sama_0945	0.40	-0.2
1,144,967	-		Sama_0945	0.40	-0.2
1,144,967	-		Sama_0945	0.40	-1.3
1,144,967	-		Sama_0945	0.40	-2.1
1,144,967	-		Sama_0945	0.40	-1.1
1,144,967	-		Sama_0945	0.40	-0.5
1,144,967	-		Sama_0945	0.40	-0.6
1,144,967	-		Sama_0945	0.40	+0.9
1,144,967	-		Sama_0945	0.40	-0.4
1,144,967	-		Sama_0945	0.40	+1.1
1,144,967	-		Sama_0945	0.40	-1.2
1,144,967	-		Sama_0945	0.40	+1.9
1,144,967	-		Sama_0945	0.40	-0.1
1,145,025	+		Sama_0945	0.46	+0.3
1,145,025	+		Sama_0945	0.46	-1.4
1,145,026	-		Sama_0945	0.46	+0.5
1,145,026	-		Sama_0945	0.46	-1.3
1,145,151	-		Sama_0945	0.58	-1.4
1,145,162	+		Sama_0945	0.59	+0.8
1,145,208	+		Sama_0945	0.64	+1.7
1,145,240	+		Sama_0945	0.67	-0.2
1,145,240	+		Sama_0945	0.67	-1.2
1,145,240	+		Sama_0945	0.67	-0.0
1,145,240	+		Sama_0945	0.67	-1.6
1,145,255	+		Sama_0945	0.69	+1.3
1,145,256	-		Sama_0945	0.69	-0.7
1,145,358	+		Sama_0945	0.79	+1.0
1,145,359	-		Sama_0945	0.79	+1.9
1,145,359	-		Sama_0945	0.79	-0.9
1,145,359	-		Sama_0945	0.79	-1.4
1,145,359	-		Sama_0945	0.79	-1.4
1,145,359	-		Sama_0945	0.79	-0.3
1,145,481	+				-0.5
1,145,481	+				-0.6
1,145,481	+				+0.6
1,145,481	+				+1.6
1,145,481	+				-0.5
1,145,481	+				+0.3
1,145,482	-				-0.3
1,145,482	-				+0.3