Strain Fitness in Shewanella oneidensis MR-1 around SOA0013

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
10,375	+	umuC	SOA0012	0.24	-1.3
10,416	-	umuC	SOA0012	0.27	-0.5
10,427	-	umuC	SOA0012	0.28	-0.3
10,449	+	umuC	SOA0012	0.30	-1.2
10,491	-	umuC	SOA0012	0.33	-1.0
10,526	+	umuC	SOA0012	0.36	-0.6
10,534	-	umuC	SOA0012	0.36	-0.6
10,534	-	umuC	SOA0012	0.36	-0.6
10,693	+	umuC	SOA0012	0.49	-0.7
10,700	-	umuC	SOA0012	0.49	+0.7
10,720	-	umuC	SOA0012	0.51	-0.6
10,785	-	umuC	SOA0012	0.56	-1.0
10,791	-	umuC	SOA0012	0.57	-0.7
10,819	+	umuC	SOA0012	0.59	-0.9
10,827	+	umuC	SOA0012	0.60	-1.0
10,835	-	umuC	SOA0012	0.60	-0.6
10,899	+	umuC	SOA0012	0.65	-1.4
10,899	+	umuC	SOA0012	0.65	+0.6
10,899	+	umuC	SOA0012	0.65	-1.7
10,899	+	umuC	SOA0012	0.65	-0.8
10,899	+	umuC	SOA0012	0.65	-0.2
10,907	-	umuC	SOA0012	0.66	-0.5
10,907	-	umuC	SOA0012	0.66	-0.7
10,907	-	umuC	SOA0012	0.66	+0.0
10,907	-	umuC	SOA0012	0.66	-0.3
10,907	-	umuC	SOA0012	0.66	-0.2
10,907	-	umuC	SOA0012	0.66	-1.1
10,967	+	umuC	SOA0012	0.71	-0.7
11,030	-	umuC	SOA0012	0.76	-1.2
11,046	+	umuC	SOA0012	0.77	+0.6
11,125	-	umuC	SOA0012	0.83	-0.9
11,171	-	umuC	SOA0012	0.87	-1.5
11,245	+				-0.7
11,266	+				-0.3
11,332	+				-0.6
11,391	-	umuD	SOA0013	0.14	-0.7
11,452	-	umuD	SOA0013	0.29	-1.6
11,471	-	umuD	SOA0013	0.34	-0.9
11,585	-	umuD	SOA0013	0.62	-0.7
11,654	+	umuD	SOA0013	0.79	-0.8
11,660	+	umuD	SOA0013	0.80	-1.3
11,668	-	umuD	SOA0013	0.82	-0.9
11,678	-	umuD	SOA0013	0.85	-0.2
11,682	-	umuD	SOA0013	0.86	-1.4
11,913	+				-0.7
12,111	+				-0.5
12,111	+				-0.7
12,113	+				-1.0
12,119	-				-0.9
12,120	-				-0.7
12,120	-				-1.8
12,204	-				-0.5
12,293	+				-0.5
12,301	-				-0.2
12,301	-				-0.8
12,303	+				-0.2
12,330	-				-3.1
12,359	-		SOA0014	0.28	-0.2
12,361	+		SOA0014	0.30	-1.1
12,561	+				-0.8
12,569	-				-0.9
12,592	+				-0.7
12,686	+				-0.2
12,686	+				+0.4