Strain Fitness in Shewanella oneidensis MR-1 around SO_A0009

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
7,943	+		SOA0008	0.14	-0.7
7,951	-		SOA0008	0.15	-0.7
7,974	+		SOA0008	0.19	-0.9
7,974	+		SOA0008	0.19	-0.7
7,976	-		SOA0008	0.19	-0.9
7,982	-		SOA0008	0.20	-0.5
8,002	+		SOA0008	0.23	-0.9
8,010	-		SOA0008	0.24	-1.2
8,055	+		SOA0008	0.30	-1.2
8,061	-		SOA0008	0.31	-0.6
8,061	-		SOA0008	0.31	-0.0
8,118	-		SOA0008	0.39	-0.9
8,174	-		SOA0008	0.46	-1.2
8,313	+		SOA0008	0.66	-0.6
8,321	-		SOA0008	0.67	-0.8
8,326	-		SOA0008	0.68	-0.7
8,365	+		SOA0008	0.73	-0.6
8,417	+		SOA0008	0.80	-0.1
8,437	+		SOA0008	0.83	-0.6
8,683	-		SO_A0009	0.45	-0.8
8,683	-		SO_A0009	0.45	-0.8
8,706	-		SO_A0009	0.54	-0.9
8,742	+		SO_A0009	0.69	-1.4
8,742	+		SO_A0009	0.69	-0.3
8,826	-				-0.4
8,877	+		SOA0010	0.14	-1.8
8,913	-		SOA0010	0.21	-0.9
8,939	+		SOA0010	0.26	-0.9
8,978	+		SOA0010	0.33	-0.6
9,184	+		SOA0010	0.73	-1.2
9,504	+		SOA0011	0.16	-1.2
9,578	-		SOA0011	0.47	-0.8
9,671	+		SOA0011	0.85	-0.8
9,671	+		SOA0011	0.85	+0.0
9,671	+		SOA0011	0.85	-0.9
9,671	+		SOA0011	0.85	-0.8
9,671	+		SOA0011	0.85	-0.9
9,679	-		SOA0011	0.88	-0.7
9,679	-		SOA0011	0.88	-0.5
9,679	-		SOA0011	0.88	-0.4
9,679	-		SOA0011	0.88	-1.5
9,679	-		SOA0011	0.88	+0.0
9,679	-		SOA0011	0.88	-0.7
9,679	-		SOA0011	0.88	-1.0
9,679	-		SOA0011	0.88	-0.4
9,692	-				-0.9
9,692	-				-0.3
9,692	-				-0.7
9,694	-				-1.6
9,756	+				-0.1
9,781	+		SO_A0174	0.19	-1.1
9,800	+		SO_A0174	0.28	-0.8