Strain Fitness in Shewanella oneidensis MR-1 around SO4486

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
4,673,031	+		SO4484	0.35	-1.2
4,673,070	+		SO4484	0.44	+0.6
4,673,070	+		SO4484	0.44	-1.2
4,673,087	-		SO4484	0.48	-0.6
4,673,267	-		SO4484	0.90	-0.4
4,673,267	-		SO4484	0.90	+0.2
4,673,267	-		SO4484	0.90	+1.1
4,673,280	+				+0.0
4,673,290	+				+1.2
4,673,290	+				-0.0
4,673,297	-				+1.1
4,673,416	+				+0.1
4,673,431	-		SO4485	0.12	-0.2
4,673,449	+		SO4485	0.15	-0.2
4,673,449	+		SO4485	0.15	+0.3
4,673,457	-		SO4485	0.16	-0.1
4,673,458	-		SO4485	0.16	+0.4
4,673,642	+		SO4485	0.49	-0.6
4,673,644	-		SO4485	0.49	+0.1
4,673,806	+		SO4485	0.78	-0.5
4,673,879	-				-0.2
4,673,939	-				-0.2
4,673,982	+		SO4486	0.23	-2.1
4,673,992	+		SO4486	0.27	-1.6
4,674,000	-		SO4486	0.30	-0.8
4,674,172	+				-0.1
4,674,231	+				+0.1
4,674,271	-		SO4487	0.13	-0.4
4,674,346	-		SO4487	0.24	-0.1
4,674,370	-		SO4487	0.28	+0.4
4,674,410	+		SO4487	0.34	+0.5
4,674,410	+		SO4487	0.34	+0.2
4,674,410	+		SO4487	0.34	-0.1
4,674,418	-		SO4487	0.35	+0.3
4,674,418	-		SO4487	0.35	-0.4
4,674,534	-		SO4487	0.52	-0.3
4,674,584	+		SO4487	0.60	+0.5
4,674,637	-		SO4487	0.68	+0.1
4,674,661	+		SO4487	0.71	+0.6
4,674,770	-		SO4487	0.88	-0.2
4,674,798	+				-0.2
4,674,806	-				+0.4
4,674,806	-				+0.3
4,674,806	-				+0.1
4,674,820	+				-0.5
4,674,842	-				-0.3
4,674,861	-				-0.7
4,674,885	-				-0.2
4,674,899	+				-0.3
4,674,902	-				-0.1
4,675,065	+		SO4488	0.16	+0.1
4,675,066	-		SO4488	0.16	-0.5
4,675,075	+		SO4488	0.17	-0.3
4,675,099	-		SO4488	0.19	+0.1
4,675,137	+		SO4488	0.22	+0.3