Strain Fitness in Shewanella oneidensis MR-1 around SO4007

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
4,148,070	-		SO4006	0.24	-1.8
4,148,078	-		SO4006	0.25	-0.5
4,148,082	-		SO4006	0.25	-0.9
4,148,099	-		SO4006	0.26	-1.5
4,148,349	+		SO4006	0.47	-1.2
4,148,489	+		SO4006	0.58	-1.1
4,148,629	-		SO4006	0.70	-0.6
4,148,671	+		SO4006	0.73	-1.4
4,148,671	+		SO4006	0.73	-1.8
4,148,676	+		SO4006	0.74	-1.6
4,148,679	-		SO4006	0.74	-1.1
4,148,779	-		SO4006	0.82	-0.1
4,148,792	+		SO4006	0.83	-1.3
4,148,962	+				-0.9
4,148,962	+				-1.4
4,148,970	-				-0.7
4,148,985	-				-1.1
4,148,998	-				-0.8
4,149,016	-				+0.4
4,149,082	+				-2.1
4,149,091	-				+0.3
4,149,328	+		SO4007	0.44	-0.7
4,149,329	+		SO4007	0.44	-0.9
4,149,411	-		SO4007	0.56	-1.1
4,149,440	-		SO4007	0.61	-1.3
4,149,557	-		SO4007	0.78	-1.5
4,149,684	-				-1.5
4,149,723	-				-2.0
4,149,825	+				-0.9
4,149,825	-				-0.5
4,149,984	-				-1.4
4,150,065	+		SO4008	0.10	-1.2
4,150,070	+		SO4008	0.10	-0.9
4,150,078	-		SO4008	0.10	-0.7
4,150,078	-		SO4008	0.10	-0.4
4,150,078	-		SO4008	0.10	-0.8
4,150,078	-		SO4008	0.10	-1.2
4,150,079	+		SO4008	0.10	-1.0
4,150,123	+		SO4008	0.12	-0.1
4,150,131	-		SO4008	0.12	-1.0
4,150,131	-		SO4008	0.12	-1.4
4,150,146	+		SO4008	0.12	-0.7
4,150,258	-		SO4008	0.15	+0.4
4,150,630	-		SO4008	0.25	-1.3