Strain Fitness in Shewanella oneidensis MR-1 around SO3898
Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
4,045,686 | - | +0.2 | |||
4,045,689 | - | +0.4 | |||
4,045,689 | - | +0.0 | |||
4,045,698 | + | +0.2 | |||
4,045,752 | - | SO3898 | 0.10 | -0.2 | |
4,045,988 | - | SO3898 | 0.30 | +0.2 | |
4,046,115 | - | SO3898 | 0.41 | -0.4 | |
4,046,115 | - | SO3898 | 0.41 | +0.3 | |
4,046,254 | - | SO3898 | 0.53 | -0.3 | |
4,046,264 | - | SO3898 | 0.54 | -0.9 | |
4,046,412 | - | SO3898 | 0.66 | -1.8 | |
4,046,523 | - | SO3898 | 0.76 | -0.9 | |
4,046,567 | - | SO3898 | 0.80 | -1.5 | |
4,046,867 | - | +0.6 | |||
4,046,882 | - | -1.9 |
Or see this region's nucleotide sequence