Strain Fitness in Shewanella oneidensis MR-1 around SO3030

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
3,139,131	+				+1.2
3,139,131	-				+1.0
3,139,131	-				-0.8
3,139,160	-				-0.5
3,139,310	-		SO3029	0.58	-0.4
3,139,599	-				+0.3
3,139,766	-				-0.6
3,139,910	-				-2.0
3,139,948	-				-0.3
3,139,950	-				-1.7
3,140,000	+				-0.1
3,140,060	+				-1.0
3,140,076	+				-1.2
3,140,084	-				-0.8
3,140,095	+				-2.2
3,140,111	+				-1.5
3,140,160	+	alcA	SO3030	0.10	-0.3
3,140,276	+	alcA	SO3030	0.18	-0.7
3,140,284	-	alcA	SO3030	0.19	-0.1
3,140,448	+	alcA	SO3030	0.30	-0.7
3,140,456	+	alcA	SO3030	0.30	-1.4
3,140,626	-	alcA	SO3030	0.41	-1.7
3,140,813	+	alcA	SO3030	0.54	-0.7
3,140,912	+	alcA	SO3030	0.61	-0.5
3,140,980	+	alcA	SO3030	0.65	-0.9
3,141,031	-	alcA	SO3030	0.68	-0.6
3,141,191	-	alcA	SO3030	0.79	-1.9
3,141,250	-	alcA	SO3030	0.83	-1.1
3,141,577	+		SO3031	0.12	+0.0
3,141,577	+		SO3031	0.12	-1.0
3,141,769	-		SO3031	0.43	-0.5
3,141,820	+		SO3031	0.51	-1.0
3,142,116	+				+0.0
3,142,330	+				-0.4
3,142,376	+				-1.2