Strain Fitness in Shewanella oneidensis MR-1 around SO2886

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
3,008,220	+				-0.0
3,008,220	+				-0.3
3,008,220	+				-0.2
3,008,228	-				-1.1
3,008,391	+				-0.2
3,008,491	+				-1.5
3,008,497	+				-0.9
3,008,530	+				+0.5
3,008,531	-				-0.9
3,008,558	+				-0.5
3,008,603	+				-0.1
3,008,728	-	nhaB	SO2886	0.15	-0.8
3,008,730	+	nhaB	SO2886	0.16	-0.8
3,008,731	+	nhaB	SO2886	0.16	+0.2
3,008,739	-	nhaB	SO2886	0.16	-1.4
3,008,781	+	nhaB	SO2886	0.19	-2.5
3,008,834	+	nhaB	SO2886	0.22	-0.8
3,008,923	+	nhaB	SO2886	0.28	-0.8
3,008,923	+	nhaB	SO2886	0.28	-0.5
3,008,931	-	nhaB	SO2886	0.28	-0.6
3,008,942	+	nhaB	SO2886	0.29	+0.2
3,009,012	+	nhaB	SO2886	0.33	-0.8
3,009,048	+	nhaB	SO2886	0.35	-0.1
3,009,056	-	nhaB	SO2886	0.36	-0.5
3,009,057	-	nhaB	SO2886	0.36	-0.6
3,009,082	-	nhaB	SO2886	0.38	+0.3
3,009,125	+	nhaB	SO2886	0.40	-1.1
3,009,132	+	nhaB	SO2886	0.41	+0.0
3,009,132	+	nhaB	SO2886	0.41	-1.4
3,009,132	+	nhaB	SO2886	0.41	-0.7
3,009,132	+	nhaB	SO2886	0.41	-0.6
3,009,132	+	nhaB	SO2886	0.41	-1.4
3,009,132	+	nhaB	SO2886	0.41	-1.1
3,009,140	-	nhaB	SO2886	0.41	-1.4
3,009,140	-	nhaB	SO2886	0.41	-1.0
3,009,140	-	nhaB	SO2886	0.41	-1.1
3,009,148	+	nhaB	SO2886	0.42	-1.6
3,009,148	+	nhaB	SO2886	0.42	-1.7
3,009,156	-	nhaB	SO2886	0.42	-1.2
3,009,156	-	nhaB	SO2886	0.42	-1.2
3,009,240	+	nhaB	SO2886	0.47	-0.2
3,009,325	-	nhaB	SO2886	0.53	-0.4
3,009,339	-	nhaB	SO2886	0.54	-0.6
3,009,410	-	nhaB	SO2886	0.58	-1.3
3,009,441	+	nhaB	SO2886	0.60	+0.2
3,009,449	-	nhaB	SO2886	0.60	-2.1
3,009,454	-	nhaB	SO2886	0.61	-0.8
3,009,462	+	nhaB	SO2886	0.61	-0.9
3,009,498	+	nhaB	SO2886	0.63	-0.9
3,009,520	+	nhaB	SO2886	0.65	-0.4
3,009,530	+	nhaB	SO2886	0.65	-1.4
3,009,538	-				+0.9
3,009,538	-	nhaB	SO2886	0.66	-1.1
3,009,544	+	nhaB	SO2886	0.66	-1.2
3,009,709	+	nhaB	SO2886	0.77	-0.8
3,009,768	+	nhaB	SO2886	0.80	-0.1
3,009,845	+	nhaB	SO2886	0.85	-0.2
3,009,888	-	nhaB	SO2886	0.88	-1.5
3,009,888	-	nhaB	SO2886	0.88	-0.8
3,009,938	+				-1.6
3,009,946	-				-0.6
3,009,946	-				-1.0
3,009,991	-				-0.6
3,010,032	+				-0.3
3,010,040	-				+0.2
3,010,053	-				-0.3
3,010,082	-				+1.1
3,010,116	+				+0.0
3,010,194	-				+0.5
3,010,195	+				+0.1
3,010,201	+				-0.2
3,010,209	-				+0.5
3,010,551	-	dsbB	SO2887	0.70	+0.5
3,010,595	-	dsbB	SO2887	0.79	-0.7
3,010,626	+	dsbB	SO2887	0.84	-0.0
3,010,626	+	dsbB	SO2887	0.84	-0.2
3,010,630	+	dsbB	SO2887	0.85	-0.5
3,010,663	+				-0.2
3,010,712	+				-0.6
3,010,881	-		SO2888	0.56	+0.0
3,010,881	-		SO2888	0.56	-0.0
3,010,920	+		SO2888	0.70	-0.2
3,010,928	-		SO2888	0.73	+0.5
3,010,928	-		SO2888	0.73	-0.2
3,010,937	-		SO2888	0.76	-0.1
3,010,944	+		SO2888	0.79	-1.7
3,010,951	+		SO2888	0.81	+0.6
3,010,971	-		SO2888	0.89	-0.1
3,010,978	-				-0.0
3,010,985	+				-1.1
3,011,011	+				+0.2
3,011,011	+				+0.2
3,011,011	+				+0.2
3,011,019	-				-1.6
3,011,019	-				+0.3
3,011,019	-				-1.2
3,011,019	-				+1.2
3,011,020	+				+0.3
3,011,021	+				-1.2
3,011,021	+				+0.4
3,011,021	+				+0.5
3,011,021	+				-0.3
3,011,021	+				+0.3
3,011,021	+				+0.5
3,011,029	-				-0.3
3,011,029	-				-0.3
3,011,029	-				-1.0
3,011,029	-				-0.4
3,011,029	-				+0.2
3,011,029	-				+0.2
3,011,029	-				-0.6
3,011,036	+				+0.5
3,011,044	-				+0.0