Strain Fitness in Shewanella oneidensis MR-1 around SO2704

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
2,820,317	+		SO2702	0.85	-0.5
2,820,367	+		SO2702	0.90	+0.7
2,820,395	+				+0.2
2,820,460	-				-0.1
2,820,469	+				+0.1
2,820,477	-				+0.2
2,820,477	-				+0.3
2,820,484	-				+0.3
2,820,558	+		SO2703	0.17	+0.5
2,820,558	+		SO2703	0.17	-0.4
2,820,566	-		SO2703	0.18	+0.0
2,820,566	-		SO2703	0.18	-1.2
2,820,572	-		SO2703	0.19	+0.5
2,820,792	+		SO2703	0.57	-0.2
2,820,868	-		SO2703	0.70	+0.1
2,820,878	-		SO2703	0.72	+0.3
2,820,884	+		SO2703	0.73	-1.0
2,820,894	-		SO2703	0.74	-0.8
2,820,921	+		SO2703	0.79	-0.1
2,820,929	-		SO2703	0.80	+1.2
2,820,944	+		SO2703	0.83	-0.7
2,820,996	-				-0.1
2,820,996	-				+0.5
2,821,107	-				+0.0
2,821,149	-				-0.1
2,821,204	-				-0.4
2,821,226	-				+0.3
2,821,234	+				+0.3
2,821,284	-		SO2704	0.10	-0.3
2,821,412	-		SO2704	0.18	+0.4
2,821,502	-		SO2704	0.23	+0.2
2,821,534	+		SO2704	0.25	+0.6
2,821,573	-		SO2704	0.27	+0.0
2,821,573	-		SO2704	0.27	-0.1
2,821,696	+		SO2704	0.34	+0.5
2,821,923	-		SO2704	0.47	-0.3
2,821,928	+		SO2704	0.47	-0.6
2,821,993	+		SO2704	0.51	+0.3
2,822,281	+		SO2704	0.68	-0.1
2,822,289	-		SO2704	0.68	+1.7
2,822,342	+		SO2704	0.71	+1.4
2,822,343	+		SO2704	0.71	-0.3
2,822,438	+		SO2704	0.77	+0.1
2,822,446	-		SO2704	0.77	+1.3
2,822,446	-		SO2704	0.77	+0.7
2,822,446	-		SO2704	0.77	-0.1
2,822,446	-		SO2704	0.77	-0.0
2,822,446	-		SO2704	0.77	+0.4
2,822,449	+		SO2704	0.78	+0.3
2,822,498	+		SO2704	0.80	-0.1
2,822,498	+		SO2704	0.80	-0.0
2,822,498	+		SO2704	0.80	+0.3
2,822,501	+		SO2704	0.81	+0.4
2,822,506	-		SO2704	0.81	+0.0
2,822,506	-		SO2704	0.81	+0.9
2,822,506	-		SO2704	0.81	+1.0
2,822,541	+		SO2704	0.83	+0.0
2,822,541	+		SO2704	0.83	-0.3
2,822,541	+		SO2704	0.83	-0.0
2,822,541	+		SO2704	0.83	+0.2
2,822,541	+		SO2704	0.83	+0.6
2,822,549	-		SO2704	0.83	+0.4
2,822,549	-		SO2704	0.83	-0.4
2,822,549	-		SO2704	0.83	+1.0
2,822,549	-		SO2704	0.83	+1.3
2,822,549	-		SO2704	0.83	+0.2
2,822,559	-		SO2704	0.84	+0.0
2,822,559	-		SO2704	0.84	-0.7
2,822,576	-		SO2704	0.85	+0.7
2,822,646	+		SO2704	0.89	-0.0
2,822,726	-				-0.6
2,822,736	+				+0.8
2,822,744	-				+1.0
2,822,789	+				+0.2
2,822,789	+				+0.6
2,822,797	-				-0.3
2,822,797	-				-0.3
2,822,852	-				-0.1
2,822,913	-				+0.3
2,822,930	+				-0.5
2,822,933	+				-1.0