Strain Fitness in Shewanella oneidensis MR-1 around SO2639

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
2,774,264	+	ldh	SO2638	0.27	-0.1
2,774,264	+	ldh	SO2638	0.27	-0.9
2,774,272	-	ldh	SO2638	0.28	-0.2
2,774,389	+	ldh	SO2638	0.39	-0.4
2,774,484	+	ldh	SO2638	0.48	-0.3
2,774,484	+	ldh	SO2638	0.48	+0.0
2,774,484	+	ldh	SO2638	0.48	-0.1
2,774,539	+	ldh	SO2638	0.54	-0.4
2,774,709	+	ldh	SO2638	0.70	-0.2
2,775,008	+				+0.3
2,775,058	+				+0.1
2,775,068	-				+0.3
2,775,229	-				+0.1
2,775,457	-		SO2639	0.72	-0.5
2,775,457	-		SO2639	0.72	-2.0
2,775,711	-		SO2640	0.27	+0.1
2,775,719	-		SO2640	0.28	-0.9
2,775,812	+		SO2640	0.48	-0.4
2,775,859	+		SO2640	0.58	+0.2
2,775,991	-		SO2640	0.87	+0.3
2,776,013	-				+0.2
2,776,049	-				+0.3
2,776,091	+				-0.3
2,776,149	+				-0.2
2,776,266	+		SO2642	0.25	+1.8
2,776,300	-		SO2642	0.32	+0.2
2,776,300	-		SO2642	0.32	+0.6
2,776,300	-		SO2642	0.32	-0.3
2,776,386	-		SO2642	0.50	+0.0
2,776,407	+		SO2642	0.55	+0.0
2,776,487	+		SO2642	0.71	+0.1
2,776,492	+		SO2642	0.72	-0.6
2,776,492	+		SO2642	0.72	-0.2
2,776,544	-		SO2642	0.83	-0.5