Strain Fitness in Shewanella oneidensis MR-1 around SO1796

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
1,883,145	+	clpX	SO1795	0.34	-2.6
1,883,153	-	clpX	SO1795	0.35	-2.1
1,883,158	-	clpX	SO1795	0.35	-1.3
1,883,327	+	clpX	SO1795	0.48	-0.5
1,883,328	-	clpX	SO1795	0.48	-0.3
1,883,342	+	clpX	SO1795	0.49	-0.8
1,883,500	+	clpX	SO1795	0.62	-1.1
1,883,530	+	clpX	SO1795	0.64	-1.9
1,883,538	-	clpX	SO1795	0.65	-1.8
1,883,562	+	clpX	SO1795	0.67	-3.3
1,883,740	+	clpX	SO1795	0.80	-0.7
1,884,062	+				-0.6
1,884,062	+				-2.3
1,884,080	-				-0.3
1,884,194	-				-0.2
1,884,747	-	lon	SO1796	0.27	+0.0
1,884,847	-	lon	SO1796	0.31	-1.4
1,884,983	-	lon	SO1796	0.37	-1.0
1,885,068	+	lon	SO1796	0.40	-0.3
1,885,139	+	lon	SO1796	0.43	-1.9
1,885,139	+	lon	SO1796	0.43	-1.8
1,885,147	-	lon	SO1796	0.43	-1.1
1,885,147	-	lon	SO1796	0.43	+0.3
1,885,262	+	lon	SO1796	0.48	-1.9
1,885,562	+	lon	SO1796	0.61	-0.7
1,885,594	+	lon	SO1796	0.62	+0.7
1,885,665	+	lon	SO1796	0.65	-0.2
1,885,720	+	lon	SO1796	0.68	-0.5
1,886,201	+	lon	SO1796	0.88	-0.9
1,886,243	+	lon	SO1796	0.90	-0.9
1,886,460	-				-1.0
1,886,541	-				-0.7
1,886,549	+				-1.3
1,887,465	+	ppiD	SO1798	0.12	+0.0