Strain Fitness in Shewanella oneidensis MR-1 around SO1655

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
1,742,391	+				-0.1
1,742,392	+				+1.2
1,742,399	-				+0.9
1,742,407	+				-0.1
1,742,531	+		SO1654	0.45	+0.2
1,742,538	-		SO1654	0.47	-0.6
1,742,566	+		SO1654	0.55	-0.8
1,742,566	+		SO1654	0.55	-0.2
1,742,566	+		SO1654	0.55	-0.3
1,742,566	+		SO1654	0.55	+1.0
1,742,566	+		SO1654	0.55	+0.1
1,743,129	-	cysQ-2	SO1655	0.51	-1.1
1,743,338	-	cysQ-2	SO1655	0.78	-0.8
1,743,422	+	cysQ-2	SO1655	0.89	-0.6
1,743,428	+				-0.2
1,743,430	-				-0.5
1,743,565	-				-0.3
1,743,640	+				+0.9
1,743,690	-		SO1656	0.14	+0.8
1,743,776	+		SO1656	0.23	+0.4
1,743,776	+		SO1656	0.23	-0.4
1,743,776	+		SO1656	0.23	-0.3
1,743,776	+		SO1656	0.23	-1.0
1,743,776	+		SO1656	0.23	+0.0
1,743,784	-		SO1656	0.24	+0.5
1,743,784	-		SO1656	0.24	+0.3
1,743,784	-		SO1656	0.24	-0.2
1,743,818	-		SO1656	0.27	+0.2
1,743,820	+		SO1656	0.28	-0.9
1,743,836	+		SO1656	0.29	+0.2
1,743,855	-		SO1656	0.31	+0.1
1,743,879	+		SO1656	0.34	-1.4
1,743,976	-		SO1656	0.45	-0.3
1,744,020	-		SO1656	0.49	+0.3
1,744,073	-		SO1656	0.55	+0.3
1,744,313	-		SO1656	0.81	+0.4
1,744,327	-		SO1656	0.83	-0.5
1,744,349	-		SO1656	0.85	+0.5
1,744,463	-				-1.0
1,744,473	-				+0.5