Strain Fitness in Shewanella oneidensis MR-1 around SO1191

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
1,233,779	+		SO1190	0.55	+0.3
1,233,932	+		SO1190	0.73	-0.6
1,234,062	+		SO1190	0.89	+0.3
1,234,062	+		SO1190	0.89	+1.1
1,234,070	-				-0.5
1,234,070	-				-0.5
1,234,070	-				-1.9
1,234,134	+				+1.2
1,234,139	+				+0.2
1,234,139	+				+0.1
1,234,332	-				-1.2
1,234,332	-				-0.9
1,234,366	-				+0.3
1,234,434	-				-2.0
1,234,451	-				-2.4
1,234,463	+	greA	SO1191	0.10	-2.9
1,234,474	+	greA	SO1191	0.12	-4.2
1,234,577	-	greA	SO1191	0.34	-0.9
1,234,928	-				-0.6
1,234,982	+				+1.0
1,235,040	-				-0.0
1,235,244	+		SO1192	0.14	+0.3
1,235,246	+		SO1192	0.15	+0.1
1,235,338	+		SO1192	0.32	-2.1
1,235,392	+		SO1192	0.42	-0.6
1,235,438	-		SO1192	0.51	-0.5
1,235,473	+		SO1192	0.58	+0.1
1,235,500	+		SO1192	0.63	-0.1
1,235,517	+		SO1192	0.66	-0.5
1,235,539	-		SO1192	0.70	-0.4
1,235,691	+				+0.2
1,235,691	+				-0.5
1,235,699	-				+0.4
1,235,699	-				-0.2
1,235,871	+				-0.2