Strain Fitness in Shewanella oneidensis MR-1 around SO1107
Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,149,336 | - | nqrC-2 | SO1105 | 0.73 | -0.4 |
1,149,408 | - | nqrC-2 | SO1105 | 0.82 | -0.9 |
1,149,774 | - | nqrD-2 | SO1106 | 0.35 | -2.6 |
1,150,157 | - | -1.5 | |||
1,150,323 | + | nqrE-2 | SO1107 | 0.22 | -2.2 |
1,150,427 | - | nqrE-2 | SO1107 | 0.39 | -0.7 |
1,150,539 | + | nqrE-2 | SO1107 | 0.58 | -1.4 |
1,150,556 | - | nqrE-2 | SO1107 | 0.60 | -0.7 |
1,150,638 | + | nqrE-2 | SO1107 | 0.74 | -1.1 |
Or see this region's nucleotide sequence