Strain Fitness in Shewanella oneidensis MR-1 around SO0848

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
868,065	-	napH	SO0846	0.86	-0.4
868,099	-	napH	SO0846	0.89	+0.1
868,137	-				-0.1
868,220	-				+0.2
868,235	-				-0.4
868,289	+				-1.3
868,297	-				+0.1
868,303	+				+0.3
868,303	+				+0.7
868,309	-				-0.3
868,445	+	napG	SO0847	0.27	+0.5
868,467	-	napG	SO0847	0.30	+0.6
868,475	-	napG	SO0847	0.32	-0.0
868,522	+	napG	SO0847	0.38	+0.5
868,594	-	napG	SO0847	0.48	+0.1
868,610	-	napG	SO0847	0.50	+0.1
868,640	-	napG	SO0847	0.54	-0.7
868,728	+	napG	SO0847	0.66	+0.4
868,728	+	napG	SO0847	0.66	-0.6
868,760	-	napG	SO0847	0.70	+0.4
868,800	+	napG	SO0847	0.76	+0.5
868,800	+	napG	SO0847	0.76	+0.1
868,800	+	napG	SO0847	0.76	+0.1
868,800	+	napG	SO0847	0.76	+0.3
868,800	+	napG	SO0847	0.76	-0.2
868,800	+	napG	SO0847	0.76	-0.1
868,800	+	napG	SO0847	0.76	+0.2
868,800	+	napG	SO0847	0.76	+0.3
868,800	+	napG	SO0847	0.76	-0.1
868,800	+	napG	SO0847	0.76	+0.4
868,808	-	napG	SO0847	0.77	+0.5
868,808	-	napG	SO0847	0.77	+0.2
868,808	-	napG	SO0847	0.77	-0.5
868,808	-	napG	SO0847	0.77	+0.2
868,808	-	napG	SO0847	0.77	+0.0
868,825	+	napG	SO0847	0.79	-0.3
868,837	+	napG	SO0847	0.81	+0.7
868,845	-	napG	SO0847	0.82	-0.4
868,976	+				+0.1
868,977	+				+0.5
868,985	-				-0.6
869,028	-				-0.1
869,028	-				+0.0
869,034	-				-0.3
869,035	-				+0.1
869,173	+				+0.8
869,226	-				+0.3
869,254	-				-0.2
869,254	-				-0.1
869,307	+	napA	SO0848	0.11	+1.3
869,315	-	napA	SO0848	0.12	-2.2
869,360	+	napA	SO0848	0.13	-0.5
869,376	-	napA	SO0848	0.14	+0.2
869,412	+	napA	SO0848	0.15	+0.2
869,412	+	napA	SO0848	0.15	+0.5
869,469	-	napA	SO0848	0.18	-0.3
869,535	+	napA	SO0848	0.20	-0.3
869,594	-	napA	SO0848	0.23	+0.8
869,594	-	napA	SO0848	0.23	+0.6
869,786	+	napA	SO0848	0.31	+0.6
869,789	-	napA	SO0848	0.31	-0.1
869,802	+	napA	SO0848	0.31	+0.5
869,802	+	napA	SO0848	0.31	+0.6
869,802	+	napA	SO0848	0.31	-0.2
869,810	-	napA	SO0848	0.31	+0.2
869,810	-	napA	SO0848	0.31	+0.3
869,833	+	napA	SO0848	0.32	+0.0
869,833	+	napA	SO0848	0.32	+0.7
869,955	-	napA	SO0848	0.37	+0.6
870,075	+	napA	SO0848	0.42	-0.3
870,083	-	napA	SO0848	0.42	-0.4
870,119	-	napA	SO0848	0.44	+0.3
870,274	+	napA	SO0848	0.50	-0.1
870,282	-	napA	SO0848	0.51	+0.0
870,409	-	napA	SO0848	0.56	+0.8
870,417	-	napA	SO0848	0.56	+0.4
870,433	+	napA	SO0848	0.57	+0.9
870,433	+	napA	SO0848	0.57	-0.2
870,499	-	napA	SO0848	0.59	+0.3
870,499	-	napA	SO0848	0.59	+0.3
870,526	-	napA	SO0848	0.60	+1.4
870,665	+	napA	SO0848	0.66	+0.6
870,687	-	napA	SO0848	0.67	-0.6
870,687	-	napA	SO0848	0.67	-0.4
870,814	+	napA	SO0848	0.72	+0.5
870,883	-	napA	SO0848	0.75	-0.3
870,938	-	napA	SO0848	0.77	+0.6
870,961	-	napA	SO0848	0.78	-0.1
870,971	+	napA	SO0848	0.78	+0.2
871,047	-	napA	SO0848	0.81	+0.1
871,065	+	napA	SO0848	0.82	+0.2
871,073	-	napA	SO0848	0.82	-0.6
871,090	+	napA	SO0848	0.83	+0.9
871,263	+				-0.1
871,263	+				+1.2
871,280	-				+1.5
871,295	-				+0.5
871,332	+				-0.1
871,359	-				-0.3
871,381	-				-0.4
871,409	-				+0.8
871,519	-				-0.4
871,519	-				-0.7
871,662	-	napD	SO0849	0.55	+0.1
871,728	-	napD	SO0849	0.78	+0.1
871,738	-	napD	SO0849	0.81	+0.5
871,745	-	napD	SO0849	0.84	-0.1
871,867	+				+0.2
871,875	-				-0.3
872,039	-				-0.3
872,039	-				-0.1
872,039	-				-0.3
872,348	+				+0.4
872,348	+				+0.1
872,356	-				+0.3
872,356	-				-0.4
872,431	-				-0.6
872,454	+				+0.0