Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35930

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,760,774	-		PGA1_c35920	0.50	-1.1
3,761,007	-		PGA1_c35920	0.76	+0.7
3,761,012	+		PGA1_c35920	0.77	-1.2
3,761,022	+		PGA1_c35920	0.78	-1.1
3,761,190	-				-0.2
3,761,195	-				+1.6
3,761,197	-				-0.5
3,761,197	-				-0.1
3,761,199	+				-1.0
3,761,204	+				+1.3
3,761,209	+				-0.1
3,761,209	+				+0.4
3,761,209	+				-2.0
3,761,209	+				-0.7
3,761,209	+				-1.2
3,761,209	+				-0.4
3,761,209	+				-1.2
3,761,209	+				-1.7
3,761,209	+				+0.8
3,761,217	-				+0.4
3,761,217	-				-1.0
3,761,217	-				+1.2
3,761,217	-				-1.0
3,761,219	+				+0.2
3,761,220	+				+1.0
3,761,285	+				-0.3
3,761,293	-				-0.0
3,761,293	-				-0.1
3,761,333	-				+1.8
3,761,335	+				-1.2
3,761,372	+				+0.1
3,761,462	+				-1.4
3,761,462	+				-2.0
3,761,462	+				-0.3
3,761,470	-				-0.0
3,761,500	-		PGA1_c35930	0.10	+2.1
3,761,506	+		PGA1_c35930	0.11	-0.8
3,761,533	-		PGA1_c35930	0.14	-0.4
3,761,651	+		PGA1_c35930	0.26	+0.3
3,761,679	-		PGA1_c35930	0.28	+0.7
3,761,739	+		PGA1_c35930	0.34	-0.5
3,761,770	+		PGA1_c35930	0.38	-1.2
3,761,790	+		PGA1_c35930	0.40	+0.5
3,761,988	+		PGA1_c35930	0.60	+1.5
3,762,031	+		PGA1_c35930	0.64	-0.3
3,762,048	-		PGA1_c35930	0.66	-0.7
3,762,065	-		PGA1_c35930	0.67	-3.0
3,762,075	-		PGA1_c35930	0.68	+0.6
3,762,075	-		PGA1_c35930	0.68	+0.4
3,762,089	+		PGA1_c35930	0.70	-0.9
3,762,090	-		PGA1_c35930	0.70	+0.2
3,762,138	-		PGA1_c35930	0.75	-1.2
3,762,163	+		PGA1_c35930	0.77	-0.7
3,762,171	+		PGA1_c35930	0.78	+0.5
3,762,171	-		PGA1_c35930	0.78	-1.2
3,762,171	-		PGA1_c35930	0.78	-1.2
3,762,186	-		PGA1_c35930	0.80	-0.4
3,762,303	-				-0.7
3,762,356	+				-0.1
3,762,413	+				-1.2
3,762,416	-				+0.3
3,762,418	+				+0.3
3,762,418	+				-3.1
3,762,418	+				+0.4
3,762,418	+				-1.1
3,762,418	+				-0.8
3,762,418	+				-1.0
3,762,418	+				+0.9
3,762,418	+				-0.2
3,762,418	+				-0.7
3,762,418	+				-1.0
3,762,418	+				+0.8
3,762,418	+				-1.2
3,762,426	-				-0.2
3,762,426	-				-1.8
3,762,426	-				-3.6
3,762,426	-				-1.5
3,762,426	-				-0.9
3,762,426	-				+0.5
3,762,426	-				-1.1
3,762,452	+				+0.1
3,762,455	-				-0.4
3,762,519	+				+0.9
3,762,519	+				-2.0
3,762,527	-				+0.5
3,762,617	+		PGA1_c35940	0.14	-1.0
3,762,639	+		PGA1_c35940	0.15	-0.0
3,762,649	-		PGA1_c35940	0.16	-0.8
3,762,716	+		PGA1_c35940	0.20	-0.7
3,762,716	+		PGA1_c35940	0.20	-0.7
3,762,753	+		PGA1_c35940	0.22	-1.9
3,762,822	-		PGA1_c35940	0.26	-0.0
3,762,857	+		PGA1_c35940	0.28	-1.0
3,762,857	+		PGA1_c35940	0.28	-1.3
3,762,865	-		PGA1_c35940	0.28	-0.0
3,762,865	-		PGA1_c35940	0.28	-1.1
3,762,916	-		PGA1_c35940	0.31	-0.6
3,762,949	+		PGA1_c35940	0.33	+0.1
3,762,957	-		PGA1_c35940	0.34	+0.6
3,762,958	-		PGA1_c35940	0.34	-1.6
3,762,977	+		PGA1_c35940	0.35	-0.8
3,762,985	-		PGA1_c35940	0.35	-2.4
3,762,987	+		PGA1_c35940	0.36	-1.9
3,762,989	-		PGA1_c35940	0.36	-0.3
3,763,027	+		PGA1_c35940	0.38	+0.8
3,763,045	-		PGA1_c35940	0.39	-1.1
3,763,056	+		PGA1_c35940	0.40	-1.6
3,763,056	+		PGA1_c35940	0.40	-0.4
3,763,056	+		PGA1_c35940	0.40	-2.9
3,763,056	+		PGA1_c35940	0.40	-1.9
3,763,056	+		PGA1_c35940	0.40	-1.7
3,763,056	+		PGA1_c35940	0.40	-1.8
3,763,056	+		PGA1_c35940	0.40	-0.3
3,763,064	-		PGA1_c35940	0.40	+1.2
3,763,064	-		PGA1_c35940	0.40	-0.2
3,763,064	-		PGA1_c35940	0.40	-0.5
3,763,064	-		PGA1_c35940	0.40	+0.9
3,763,064	-		PGA1_c35940	0.40	+0.2
3,763,085	+		PGA1_c35940	0.41	+0.8
3,763,136	+		PGA1_c35940	0.44	-0.1
3,763,158	-		PGA1_c35940	0.46	-0.6
3,763,160	+		PGA1_c35940	0.46	-0.0
3,763,163	-		PGA1_c35940	0.46	-0.1
3,763,169	+		PGA1_c35940	0.46	+0.4
3,763,192	-		PGA1_c35940	0.48	-1.0
3,763,193	-		PGA1_c35940	0.48	-1.0
3,763,193	-		PGA1_c35940	0.48	-1.0
3,763,240	+		PGA1_c35940	0.50	-0.9
3,763,248	-		PGA1_c35940	0.51	-0.4
3,763,250	+		PGA1_c35940	0.51	-1.2
3,763,279	-		PGA1_c35940	0.53	-0.4
3,763,318	+		PGA1_c35940	0.55	+0.5