Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35920

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,759,355	+		PGA1_c35900	0.86	-3.6
3,759,384	-		PGA1_c35900	0.87	-0.9
3,759,434	+				-1.1
3,759,466	-				-0.2
3,759,479	+				+0.2
3,759,479	+				-1.0
3,759,503	-				-0.8
3,759,525	-				-2.8
3,759,574	+				-1.0
3,759,593	-				-0.1
3,759,652	+				-1.1
3,759,660	-				+0.8
3,759,728	+		PGA1_c35910	0.18	-0.9
3,759,751	+		PGA1_c35910	0.21	-1.2
3,759,752	+		PGA1_c35910	0.21	-1.2
3,759,752	+		PGA1_c35910	0.21	-0.4
3,759,820	+		PGA1_c35910	0.31	-2.1
3,759,820	+		PGA1_c35910	0.31	-0.8
3,759,820	+		PGA1_c35910	0.31	-1.8
3,759,828	-		PGA1_c35910	0.32	-0.7
3,759,828	-		PGA1_c35910	0.32	-2.8
3,759,828	-		PGA1_c35910	0.32	-2.7
3,759,853	-		PGA1_c35910	0.36	+0.3
3,759,856	+		PGA1_c35910	0.36	-1.9
3,759,856	+		PGA1_c35910	0.36	-2.1
3,759,864	-		PGA1_c35910	0.38	-0.6
3,759,945	+		PGA1_c35910	0.49	-0.1
3,759,953	-		PGA1_c35910	0.50	-0.2
3,760,073	+		PGA1_c35910	0.68	-2.0
3,760,081	-		PGA1_c35910	0.69	+0.1
3,760,116	-		PGA1_c35910	0.74	-0.4
3,760,120	+		PGA1_c35910	0.74	-1.5
3,760,149	+		PGA1_c35910	0.79	+0.1
3,760,155	+		PGA1_c35910	0.80	-1.7
3,760,155	+		PGA1_c35910	0.80	-0.7
3,760,155	+		PGA1_c35910	0.80	+0.5
3,760,165	+		PGA1_c35910	0.81	-0.3
3,760,224	-		PGA1_c35910	0.89	-0.1
3,760,224	-		PGA1_c35910	0.89	+0.3
3,760,272	-				-2.9
3,760,774	-		PGA1_c35920	0.50	-1.1
3,761,007	-		PGA1_c35920	0.76	+0.7
3,761,012	+		PGA1_c35920	0.77	-1.2
3,761,022	+		PGA1_c35920	0.78	-1.1
3,761,190	-				-0.2
3,761,195	-				+1.6
3,761,197	-				-0.5
3,761,197	-				-0.1
3,761,199	+				-1.0
3,761,204	+				+1.3
3,761,209	+				-0.1
3,761,209	+				+0.4
3,761,209	+				-2.0
3,761,209	+				-0.7
3,761,209	+				-1.2
3,761,209	+				-0.4
3,761,209	+				-1.2
3,761,209	+				-1.7
3,761,209	+				+0.8
3,761,217	-				+0.4
3,761,217	-				-1.0
3,761,217	-				+1.2
3,761,217	-				-1.0
3,761,219	+				+0.2
3,761,220	+				+1.0
3,761,285	+				-0.3
3,761,293	-				-0.0
3,761,293	-				-0.1
3,761,333	-				+1.8
3,761,335	+				-1.2
3,761,372	+				+0.1
3,761,462	+				-1.4
3,761,462	+				-2.0
3,761,462	+				-0.3
3,761,470	-				-0.0
3,761,500	-		PGA1_c35930	0.10	+2.1
3,761,506	+		PGA1_c35930	0.11	-0.8
3,761,533	-		PGA1_c35930	0.14	-0.4
3,761,651	+		PGA1_c35930	0.26	+0.3
3,761,679	-		PGA1_c35930	0.28	+0.7
3,761,739	+		PGA1_c35930	0.34	-0.5
3,761,770	+		PGA1_c35930	0.38	-1.2
3,761,790	+		PGA1_c35930	0.40	+0.5
3,761,988	+		PGA1_c35930	0.60	+1.5
3,762,031	+		PGA1_c35930	0.64	-0.3
3,762,048	-		PGA1_c35930	0.66	-0.7
3,762,065	-		PGA1_c35930	0.67	-3.0
3,762,075	-		PGA1_c35930	0.68	+0.6
3,762,075	-		PGA1_c35930	0.68	+0.4
3,762,089	+		PGA1_c35930	0.70	-0.9
3,762,090	-		PGA1_c35930	0.70	+0.2
3,762,138	-		PGA1_c35930	0.75	-1.2
3,762,163	+		PGA1_c35930	0.77	-0.7
3,762,171	+		PGA1_c35930	0.78	+0.5
3,762,171	-		PGA1_c35930	0.78	-1.2
3,762,171	-		PGA1_c35930	0.78	-1.2
3,762,186	-		PGA1_c35930	0.80	-0.4