Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34350

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,599,732	+				+0.2
3,599,738	+				+0.1
3,599,740	-				+0.2
3,599,753	+				+0.8
3,599,753	+				-0.2
3,599,753	+				-0.2
3,599,761	-				+0.5
3,599,764	-				-1.8
3,599,787	-				+1.4
3,599,797	+				-1.0
3,599,797	+				-0.3
3,599,805	-				-0.6
3,599,807	+				+0.7
3,599,815	+				+0.1
3,599,815	-				+0.4
3,599,849	+				-1.2
3,599,857	-				-1.0
3,599,865	+				-0.6
3,599,958	+				-2.3
3,599,958	+				+0.8
3,599,966	-				-0.8
3,599,966	-				+0.8
3,600,009	-				-3.2
3,600,011	+				+0.5
3,600,031	+		PGA1_c34340	0.11	+0.2
3,600,031	+		PGA1_c34340	0.11	-0.2
3,600,039	-		PGA1_c34340	0.12	+0.7
3,600,039	-		PGA1_c34340	0.12	+1.2
3,600,039	-		PGA1_c34340	0.12	-0.2
3,600,039	-		PGA1_c34340	0.12	+0.4
3,600,134	+		PGA1_c34340	0.29	+0.9
3,600,134	+		PGA1_c34340	0.29	+0.7
3,600,142	-		PGA1_c34340	0.30	-1.2
3,600,185	-		PGA1_c34340	0.38	+1.4
3,600,199	-		PGA1_c34340	0.40	+0.8
3,600,307	-		PGA1_c34340	0.59	-0.2
3,600,312	+		PGA1_c34340	0.60	-1.0
3,600,312	-		PGA1_c34340	0.60	-0.5
3,600,322	+		PGA1_c34340	0.62	-0.6
3,600,353	-		PGA1_c34340	0.67	+0.5
3,600,411	+		PGA1_c34340	0.78	+0.5
3,600,417	+		PGA1_c34340	0.79	-0.5
3,600,435	-		PGA1_c34340	0.82	-0.5
3,600,453	+		PGA1_c34340	0.85	+0.6
3,600,461	-		PGA1_c34340	0.86	-0.8
3,600,461	-		PGA1_c34340	0.86	-1.0
3,600,476	-		PGA1_c34340	0.89	-0.5
3,600,485	+				+0.0
3,600,508	+				-0.1
3,600,553	+				-1.5
3,600,563	-				-0.2
3,600,599	-				-1.1
3,600,615	+				-0.4
3,600,657	+				+0.5
3,600,657	+				-1.3
3,600,665	-				+1.0
3,600,674	-				+2.4
3,600,764	+				-0.1
3,600,801	-		PGA1_c34350	0.11	+1.0
3,600,801	-		PGA1_c34350	0.11	+1.4
3,600,812	-		PGA1_c34350	0.12	+0.3
3,600,812	-		PGA1_c34350	0.12	-0.0
3,600,881	-		PGA1_c34350	0.18	+0.9
3,600,895	-		PGA1_c34350	0.19	-0.3
3,600,982	+		PGA1_c34350	0.26	-1.0
3,601,033	+		PGA1_c34350	0.31	-0.2
3,601,049	-		PGA1_c34350	0.32	+0.7
3,601,112	+		PGA1_c34350	0.37	-0.6
3,601,141	+		PGA1_c34350	0.40	-1.0
3,601,141	+		PGA1_c34350	0.40	+1.6
3,601,222	+		PGA1_c34350	0.47	+0.8
3,601,247	+		PGA1_c34350	0.49	-0.5
3,601,290	-		PGA1_c34350	0.52	-0.6
3,601,336	-		PGA1_c34350	0.56	+0.1
3,601,350	+		PGA1_c34350	0.57	+0.0
3,601,390	+		PGA1_c34350	0.61	+0.6
3,601,501	-		PGA1_c34350	0.70	+1.4
3,601,544	-		PGA1_c34350	0.74	+0.4
3,601,551	+		PGA1_c34350	0.75	-0.5
3,601,564	-		PGA1_c34350	0.76	+0.8
3,601,651	-		PGA1_c34350	0.83	+0.1
3,601,714	+		PGA1_c34350	0.88	+1.3
3,601,730	+		PGA1_c34350	0.90	+0.8
3,601,822	-				-0.3
3,601,848	+				-0.3
3,601,848	+				+0.3
3,601,925	+				-0.2
3,601,925	+				-0.4
3,601,925	+				-0.4
3,601,933	-				+0.5
3,601,933	-				+0.9
3,601,933	-				+0.5
3,601,933	-				-1.3
3,601,973	-				+1.8
3,602,105	-		PGA1_c34360	0.16	-0.2
3,602,138	-		PGA1_c34360	0.19	-1.2
3,602,172	-		PGA1_c34360	0.22	+0.0
3,602,173	+		PGA1_c34360	0.22	+0.7
3,602,204	-		PGA1_c34360	0.24	-0.1
3,602,238	-		PGA1_c34360	0.27	-0.1
3,602,269	-		PGA1_c34360	0.30	-0.8
3,602,310	+		PGA1_c34360	0.33	+1.2
3,602,310	+		PGA1_c34360	0.33	-1.0
3,602,310	+		PGA1_c34360	0.33	-0.7
3,602,310	+		PGA1_c34360	0.33	-0.3
3,602,310	+		PGA1_c34360	0.33	+1.1
3,602,310	+		PGA1_c34360	0.33	-1.3
3,602,318	-		PGA1_c34360	0.34	+0.1
3,602,318	-		PGA1_c34360	0.34	-0.0
3,602,318	-		PGA1_c34360	0.34	-0.1
3,602,318	-		PGA1_c34360	0.34	+0.6
3,602,318	-		PGA1_c34360	0.34	-0.5
3,602,385	+		PGA1_c34360	0.40	-0.6
3,602,453	+		PGA1_c34360	0.46	-1.0
3,602,495	+		PGA1_c34360	0.49	+0.9
3,602,526	+		PGA1_c34360	0.52	-3.1
3,602,636	+		PGA1_c34360	0.61	-1.3
3,602,696	-		PGA1_c34360	0.66	+0.1
3,602,696	-		PGA1_c34360	0.66	+0.8
3,602,732	-		PGA1_c34360	0.69	+0.7
3,602,790	-		PGA1_c34360	0.74	-2.0
3,602,810	+		PGA1_c34360	0.76	-0.0
3,602,832	+		PGA1_c34360	0.78	+0.2
3,602,839	+		PGA1_c34360	0.78	+0.5
3,602,847	-		PGA1_c34360	0.79	-0.8