Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33580

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,519,391	-				+1.6
3,519,421	-				-1.9
3,519,449	+				+0.5
3,519,449	+				+1.5
3,519,449	+				+0.3
3,519,449	+				-0.9
3,519,449	+				+1.0
3,519,449	+				-0.3
3,519,449	+				+0.2
3,519,449	+				-0.5
3,519,449	+				+0.4
3,519,449	+				+0.7
3,519,449	+				+0.2
3,519,449	+				-0.1
3,519,449	+				+1.3
3,519,449	+				+0.6
3,519,449	+				+0.8
3,519,449	+				-2.5
3,519,449	+				+0.7
3,519,449	+				-0.9
3,519,449	+				+0.2
3,519,449	+				+0.4
3,519,449	+				+2.0
3,519,457	-		PGA1_c33580	0.11	+1.2
3,519,457	-		PGA1_c33580	0.11	+0.8
3,519,457	-		PGA1_c33580	0.11	+0.7
3,519,457	-		PGA1_c33580	0.11	-2.9
3,519,457	-		PGA1_c33580	0.11	+1.4
3,519,457	-		PGA1_c33580	0.11	+0.0
3,519,457	-		PGA1_c33580	0.11	-1.0
3,519,457	-		PGA1_c33580	0.11	+1.6
3,519,457	-		PGA1_c33580	0.11	+0.7
3,519,457	-		PGA1_c33580	0.11	-0.3
3,519,457	-		PGA1_c33580	0.11	+0.9
3,519,457	-		PGA1_c33580	0.11	-1.8
3,519,457	-		PGA1_c33580	0.11	+2.0
3,519,457	-		PGA1_c33580	0.11	-2.5
3,519,457	-		PGA1_c33580	0.11	+0.0
3,519,457	-		PGA1_c33580	0.11	+1.2
3,519,457	-		PGA1_c33580	0.11	-3.0
3,519,457	-		PGA1_c33580	0.11	-1.3
3,519,457	-		PGA1_c33580	0.11	+1.1
3,519,457	-		PGA1_c33580	0.11	+1.5
3,519,457	-		PGA1_c33580	0.11	+0.7
3,519,457	-		PGA1_c33580	0.11	+1.2
3,519,457	-		PGA1_c33580	0.11	-0.3
3,519,457	-		PGA1_c33580	0.11	+1.0
3,519,459	+		PGA1_c33580	0.11	+1.0
3,519,467	-		PGA1_c33580	0.12	+1.2
3,519,510	+		PGA1_c33580	0.19	-0.1
3,519,514	-		PGA1_c33580	0.20	+0.6
3,519,598	+		PGA1_c33580	0.34	+0.0
3,519,598	+		PGA1_c33580	0.34	+1.2
3,519,618	-		PGA1_c33580	0.37	-1.8
3,519,651	-		PGA1_c33580	0.42	+0.1
3,519,756	+		PGA1_c33580	0.59	-1.6
3,519,778	+		PGA1_c33580	0.63	-0.5
3,519,786	-		PGA1_c33580	0.64	+0.0
3,519,817	-		PGA1_c33580	0.69	-0.1
3,519,906	-		PGA1_c33580	0.83	+2.6
3,519,925	+		PGA1_c33580	0.87	-0.6
3,519,944	-		PGA1_c33580	0.90	+0.2
3,519,951	-				-0.7
3,519,959	+				-0.5
3,519,973	-				+1.1
3,519,980	+				+0.9
3,520,008	+				+0.2
3,520,008	+				+0.8
3,520,008	+				+3.2
3,520,008	+				-0.3
3,520,010	-				-2.7
3,520,016	-				+0.4
3,520,016	-				+0.7
3,520,016	-				+2.0
3,520,016	-				+0.6
3,520,024	+				-1.3
3,520,032	-				+0.1
3,520,060	-				-1.9
3,520,085	+				+0.5
3,520,085	+				+0.5
3,520,085	+				-0.2
3,520,093	-				+0.1
3,520,093	-				+0.3
3,520,093	-				+0.9
3,520,093	-				+1.0
3,520,093	-				-0.8
3,520,093	-				-0.2
3,520,093	-				-0.6
3,520,136	+				-0.6
3,520,146	-				-1.5
3,520,198	-		PGA1_c33590	0.16	+0.3
3,520,210	+		PGA1_c33590	0.19	-1.9
3,520,231	+		PGA1_c33590	0.23	-0.7
3,520,319	+		PGA1_c33590	0.41	-1.5
3,520,319	+		PGA1_c33590	0.41	+2.8
3,520,320	+		PGA1_c33590	0.41	+0.1
3,520,346	-		PGA1_c33590	0.46	+0.6
3,520,371	-		PGA1_c33590	0.51	-0.4
3,520,392	+		PGA1_c33590	0.55	-0.4
3,520,392	+		PGA1_c33590	0.55	+0.7
3,520,401	+		PGA1_c33590	0.57	-0.3
3,520,506	+		PGA1_c33590	0.78	-1.1
3,520,506	+		PGA1_c33590	0.78	+0.3
3,520,506	+		PGA1_c33590	0.78	-0.1
3,520,513	-		PGA1_c33590	0.80	-0.0
3,520,513	-		PGA1_c33590	0.80	+0.0
3,520,516	+		PGA1_c33590	0.80	-0.3
3,520,593	+				+0.0
3,520,596	-				+1.3
3,520,603	-				+0.7
3,520,611	+				-0.0
3,520,672	+				-0.7
3,520,681	+				+0.6
3,520,691	+				+0.4
3,520,699	-				+0.7
3,520,741	-				+0.1
3,520,741	-				+0.3
3,520,770	+				-1.1
3,520,770	+				-1.1
3,520,770	+				-1.2
3,520,770	+				-1.1
3,520,770	+				-1.1
3,520,770	+				-0.2
3,520,770	+				+0.5
3,520,770	+				-0.1
3,520,770	+				+1.0
3,520,770	+				-1.8
3,520,771	+				-0.6
3,520,778	-				-1.9
3,520,778	-				+0.4
3,520,778	-				-0.3
3,520,778	-				+1.3
3,520,836	-		PGA1_c33600	0.18	-1.1
3,520,836	-		PGA1_c33600	0.18	-2.3