Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33540

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,513,376	+		PGA1_c33520	0.51	-2.1
3,513,432	+		PGA1_c33520	0.59	+1.2
3,513,451	+		PGA1_c33520	0.62	-0.8
3,513,459	-		PGA1_c33520	0.63	-1.5
3,513,459	-		PGA1_c33520	0.63	-1.8
3,513,491	+		PGA1_c33520	0.68	-2.2
3,513,537	+		PGA1_c33520	0.75	-1.2
3,513,571	+		PGA1_c33520	0.80	-2.2
3,513,602	-		PGA1_c33520	0.84	-1.1
3,513,714	-				-1.2
3,513,714	-				-1.9
3,513,714	-				-0.3
3,514,251	+				-0.1
3,514,268	+				-1.8
3,514,268	+				-0.5
3,514,268	+				-0.7
3,514,268	-				+0.2
3,514,276	-				-2.4
3,514,342	+				+0.2
3,514,414	-				-0.4
3,514,423	+		PGA1_c33540	0.10	-0.6
3,514,431	-		PGA1_c33540	0.11	+0.3
3,514,454	+		PGA1_c33540	0.13	+1.7
3,514,462	-		PGA1_c33540	0.14	+0.1
3,514,462	-		PGA1_c33540	0.14	+1.1
3,514,483	+		PGA1_c33540	0.16	-0.6
3,514,508	-		PGA1_c33540	0.18	-2.2
3,514,529	+		PGA1_c33540	0.20	+0.0
3,514,647	+		PGA1_c33540	0.31	+0.7
3,514,647	+		PGA1_c33540	0.31	-0.8
3,514,647	+		PGA1_c33540	0.31	+0.5
3,514,647	+		PGA1_c33540	0.31	+0.4
3,514,671	+		PGA1_c33540	0.33	+0.6
3,514,671	+		PGA1_c33540	0.33	+1.1
3,514,673	+		PGA1_c33540	0.33	+1.2
3,514,740	-		PGA1_c33540	0.40	-2.5
3,514,747	-		PGA1_c33540	0.40	+0.7
3,514,747	-		PGA1_c33540	0.40	-1.7
3,514,794	+		PGA1_c33540	0.45	-0.8
3,514,794	+		PGA1_c33540	0.45	-1.3
3,514,794	+		PGA1_c33540	0.45	-1.1
3,514,794	+		PGA1_c33540	0.45	-1.3
3,514,802	-		PGA1_c33540	0.45	+0.6
3,514,802	-		PGA1_c33540	0.45	+0.4
3,514,842	+		PGA1_c33540	0.49	+0.8
3,514,860	+		PGA1_c33540	0.51	+0.9
3,514,863	-		PGA1_c33540	0.51	-1.0
3,514,868	-		PGA1_c33540	0.51	-0.9
3,514,868	-		PGA1_c33540	0.51	-0.7
3,514,873	-		PGA1_c33540	0.52	+0.1
3,514,891	-		PGA1_c33540	0.54	+0.2
3,514,973	-		PGA1_c33540	0.61	-1.3
3,515,030	+		PGA1_c33540	0.67	+0.9
3,515,156	+		PGA1_c33540	0.78	+0.1
3,515,156	+		PGA1_c33540	0.78	-0.8
3,515,350	-				+0.7
3,515,363	+				+0.2
3,515,363	+				+0.3
3,515,371	-				-0.5
3,515,414	-				+0.7
3,515,465	-				-0.5
3,515,465	-				-2.7
3,515,478	-				+0.2
3,515,579	+		PGA1_c33550	0.10	+0.0
3,515,580	+		PGA1_c33550	0.11	-0.3
3,515,626	+		PGA1_c33550	0.14	-0.5
3,515,675	-		PGA1_c33550	0.19	+0.2
3,515,685	+		PGA1_c33550	0.20	-2.2
3,515,693	-		PGA1_c33550	0.20	+0.3
3,515,697	+		PGA1_c33550	0.21	+0.7
3,515,709	+		PGA1_c33550	0.22	-1.1
3,515,731	-		PGA1_c33550	0.23	-1.1
3,515,746	-		PGA1_c33550	0.25	-0.3
3,515,762	+		PGA1_c33550	0.26	-1.3
3,515,789	+		PGA1_c33550	0.28	-1.2
3,515,828	-		PGA1_c33550	0.32	-1.2
3,515,844	-		PGA1_c33550	0.33	-0.6
3,515,928	-		PGA1_c33550	0.40	-0.9
3,516,005	+		PGA1_c33550	0.47	-0.7
3,516,010	+		PGA1_c33550	0.47	-1.9
3,516,083	+		PGA1_c33550	0.54	+0.4
3,516,083	+		PGA1_c33550	0.54	-2.1
3,516,083	+		PGA1_c33550	0.54	-0.6
3,516,083	+		PGA1_c33550	0.54	-0.2
3,516,083	+		PGA1_c33550	0.54	+0.2
3,516,083	+		PGA1_c33550	0.54	+0.1
3,516,083	+		PGA1_c33550	0.54	-0.7
3,516,088	+		PGA1_c33550	0.54	-0.2
3,516,091	-		PGA1_c33550	0.54	-0.6
3,516,091	-		PGA1_c33550	0.54	-1.3
3,516,091	-		PGA1_c33550	0.54	-0.2
3,516,134	-		PGA1_c33550	0.58	-1.1
3,516,159	-		PGA1_c33550	0.60	+0.0
3,516,235	+		PGA1_c33550	0.67	-0.3
3,516,235	+		PGA1_c33550	0.67	-1.2
3,516,235	+		PGA1_c33550	0.67	+0.0
3,516,243	-		PGA1_c33550	0.67	-1.9
3,516,243	-		PGA1_c33550	0.67	+0.7
3,516,248	-		PGA1_c33550	0.68	-0.3
3,516,249	+		PGA1_c33550	0.68	-1.5
3,516,253	-		PGA1_c33550	0.68	-0.7
3,516,253	-		PGA1_c33550	0.68	-0.5
3,516,257	-		PGA1_c33550	0.69	+0.3
3,516,335	-		PGA1_c33550	0.75	-0.8
3,516,374	+		PGA1_c33550	0.79	-0.9
3,516,387	-		PGA1_c33550	0.80	-1.2