Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33095

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,466,675	+		PGA1_c33080	0.48	+1.0
3,466,683	-		PGA1_c33080	0.50	+0.7
3,466,756	+		PGA1_c33080	0.61	-0.2
3,466,764	-		PGA1_c33080	0.62	+0.0
3,466,783	+		PGA1_c33080	0.65	+1.4
3,466,804	+		PGA1_c33080	0.68	+1.1
3,466,806	-		PGA1_c33080	0.69	+0.8
3,466,812	-		PGA1_c33080	0.69	-0.1
3,466,812	-		PGA1_c33080	0.69	-1.0
3,466,876	-		PGA1_c33080	0.79	-0.1
3,466,891	+		PGA1_c33080	0.81	-2.9
3,466,913	+		PGA1_c33080	0.85	+1.1
3,466,918	+		PGA1_c33080	0.86	+0.9
3,466,918	+		PGA1_c33080	0.86	+0.5
3,466,918	+		PGA1_c33080	0.86	-0.7
3,466,938	+		PGA1_c33080	0.89	-0.5
3,466,967	+				-0.1
3,467,002	+				+0.5
3,467,012	+				-0.3
3,467,025	-				+1.2
3,467,088	+				+1.1
3,467,091	+				+0.4
3,467,110	+				-0.2
3,467,146	+				-0.5
3,467,146	+				-0.1
3,467,180	-				+1.2
3,467,180	-				-0.8
3,467,195	+		PGA1_c33090	0.11	-0.6
3,467,195	+		PGA1_c33090	0.11	+0.0
3,467,209	+		PGA1_c33090	0.14	-0.4
3,467,263	+		PGA1_c33090	0.27	-0.5
3,467,263	+		PGA1_c33090	0.27	-0.1
3,467,271	-		PGA1_c33090	0.29	+1.0
3,467,271	-		PGA1_c33090	0.29	-0.4
3,467,409	+		PGA1_c33090	0.63	+0.4
3,467,414	+		PGA1_c33090	0.64	-0.8
3,467,414	+		PGA1_c33090	0.64	-1.6
3,467,414	+		PGA1_c33090	0.64	+0.2
3,467,417	-		PGA1_c33090	0.64	+1.2
3,467,422	-		PGA1_c33090	0.66	+0.5
3,467,436	-		PGA1_c33090	0.69	+0.1
3,467,460	-		PGA1_c33090	0.75	+1.1
3,467,461	+		PGA1_c33090	0.75	+0.4
3,467,467	-		PGA1_c33090	0.77	-0.7
3,467,482	+		PGA1_c33090	0.80	-1.0
3,467,520	+		PGA1_c33090	0.89	-0.8
3,467,520	+		PGA1_c33090	0.89	+1.0
3,467,520	+		PGA1_c33090	0.89	+0.8
3,467,557	+				+0.2
3,467,560	-				+0.4
3,467,567	-				-0.5
3,467,575	-				+0.8
3,467,643	+				-1.8
3,467,695	+				+0.1
3,467,703	-				+0.2
3,467,736	+		PGA1_c33095	0.13	-0.9
3,467,736	-		PGA1_c33095	0.13	+0.8
3,467,795	-		PGA1_c33095	0.20	-1.0
3,467,802	+		PGA1_c33095	0.21	+0.5
3,467,802	+		PGA1_c33095	0.21	+0.6
3,467,806	-		PGA1_c33095	0.22	-1.7
3,467,828	+		PGA1_c33095	0.24	+0.5
3,467,833	+		PGA1_c33095	0.25	-0.4
3,467,963	+		PGA1_c33095	0.41	-0.5
3,467,963	+		PGA1_c33095	0.41	+0.2
3,467,968	+		PGA1_c33095	0.41	-0.4
3,467,971	-		PGA1_c33095	0.42	-0.4
3,467,973	+		PGA1_c33095	0.42	-0.6
3,467,976	-		PGA1_c33095	0.42	+0.4
3,467,981	-		PGA1_c33095	0.43	-1.1
3,467,981	-		PGA1_c33095	0.43	-1.2
3,467,981	-		PGA1_c33095	0.43	-0.8
3,468,007	-		PGA1_c33095	0.46	-1.5
3,468,025	+		PGA1_c33095	0.48	-0.4
3,468,145	+		PGA1_c33095	0.63	+0.8
3,468,153	-		PGA1_c33095	0.64	-0.2
3,468,158	-		PGA1_c33095	0.64	+1.2
3,468,170	+		PGA1_c33095	0.66	+0.8
3,468,178	-		PGA1_c33095	0.67	+0.6
3,468,209	-		PGA1_c33095	0.70	+1.9
3,468,209	-		PGA1_c33095	0.70	-0.2
3,468,209	-		PGA1_c33095	0.70	-1.6
3,468,230	-		PGA1_c33095	0.73	-2.5
3,468,240	+		PGA1_c33095	0.74	+0.0
3,468,335	+				-0.1
3,468,378	+				-1.9
3,468,396	-				+0.3
3,468,502	+		PGA1_c33100	0.24	+1.7
3,468,528	-		PGA1_c33100	0.27	+0.5
3,468,571	+		PGA1_c33100	0.32	+0.2
3,468,613	-		PGA1_c33100	0.37	+1.0
3,468,636	+		PGA1_c33100	0.39	-1.1
3,468,641	+		PGA1_c33100	0.40	-0.1
3,468,645	-		PGA1_c33100	0.40	+0.5
3,468,715	-		PGA1_c33100	0.48	+0.0
3,468,715	-		PGA1_c33100	0.48	+0.6
3,468,785	+		PGA1_c33100	0.56	+0.3
3,468,793	-		PGA1_c33100	0.57	-0.3
3,468,793	-		PGA1_c33100	0.57	+0.3
3,468,812	+		PGA1_c33100	0.59	-1.9
3,468,812	+		PGA1_c33100	0.59	+0.0
3,468,824	+		PGA1_c33100	0.61	+0.8
3,468,824	+		PGA1_c33100	0.61	-0.8
3,468,869	-		PGA1_c33100	0.66	+0.2
3,468,886	+		PGA1_c33100	0.67	+2.1
3,468,916	+		PGA1_c33100	0.71	+0.5
3,468,929	-		PGA1_c33100	0.72	-0.4
3,468,961	+		PGA1_c33100	0.76	+1.0
3,468,961	+		PGA1_c33100	0.76	-0.8
3,468,969	-		PGA1_c33100	0.77	-0.1
3,468,969	-		PGA1_c33100	0.77	+0.0
3,469,011	-		PGA1_c33100	0.81	+1.2
3,469,023	+		PGA1_c33100	0.83	-0.4
3,469,036	-		PGA1_c33100	0.84	+0.9
3,469,092	-				+0.2
3,469,138	+				-1.9
3,469,138	+				+1.2
3,469,140	+				-1.6
3,469,230	-				+0.0
3,469,245	+				+0.2
3,469,253	-				+0.4
3,469,270	+				+0.6
3,469,275	+				+1.1
3,469,275	+				-1.9
3,469,275	+				+0.2
3,469,278	-				-0.1
3,469,279	-				+0.6
3,469,283	-				-0.4
3,469,283	-				-0.2
3,469,283	-				-0.3
3,469,283	-				+0.2
3,469,288	-				+0.2
3,469,312	+				-0.3
3,469,312	+				+0.4
3,469,337	-				+0.2
3,469,378	+				+0.2
3,469,386	-				-0.0
3,469,386	-				-1.0
3,469,414	+				-0.0
3,469,421	+				-0.5
3,469,448	+				-0.1