Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32880

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,448,256	+		PGA1_c32870	0.51	-0.7
3,448,307	+		PGA1_c32870	0.54	+0.4
3,448,315	-		PGA1_c32870	0.54	-0.4
3,448,399	+		PGA1_c32870	0.59	-0.1
3,448,399	+		PGA1_c32870	0.59	+0.2
3,448,449	+		PGA1_c32870	0.62	+0.6
3,448,449	+		PGA1_c32870	0.62	-0.4
3,448,457	-		PGA1_c32870	0.62	-0.4
3,448,579	-		PGA1_c32870	0.69	-0.5
3,448,638	-		PGA1_c32870	0.73	-2.6
3,448,692	-		PGA1_c32870	0.76	-1.7
3,448,694	+		PGA1_c32870	0.76	-0.5
3,448,694	+		PGA1_c32870	0.76	+0.2
3,448,694	+		PGA1_c32870	0.76	+0.2
3,448,708	-		PGA1_c32870	0.77	+2.5
3,448,746	+		PGA1_c32870	0.79	+0.8
3,448,767	-		PGA1_c32870	0.80	+1.2
3,448,782	+		PGA1_c32870	0.81	-1.8
3,448,784	+		PGA1_c32870	0.81	-0.8
3,448,915	-		PGA1_c32870	0.89	-0.8
3,448,954	+				+1.2
3,449,072	+				-0.4
3,449,077	+				-0.7
3,449,160	+				-0.0
3,449,185	-				-2.0
3,449,226	+				-0.4
3,449,228	-				+1.0
3,449,234	-				+0.2
3,449,236	+				+1.8
3,449,238	+				+1.0
3,449,246	-				+0.1
3,449,293	+				-0.6
3,449,293	+				+2.6
3,449,301	-				-2.7
3,449,303	+				+2.2
3,449,306	-				+0.2
3,449,306	-				-0.2
3,449,311	-				+1.2
3,449,311	-				+1.1
3,449,362	-				+0.3
3,449,454	+		PGA1_c32880	0.17	-2.6
3,449,498	+		PGA1_c32880	0.20	+1.2
3,449,505	-		PGA1_c32880	0.21	-0.8
3,449,528	+		PGA1_c32880	0.22	-0.4
3,449,549	-		PGA1_c32880	0.24	-1.4
3,449,569	+		PGA1_c32880	0.26	-0.0
3,449,620	+		PGA1_c32880	0.30	+0.9
3,449,657	-		PGA1_c32880	0.33	+0.0
3,449,680	+		PGA1_c32880	0.34	-0.6
3,449,687	-		PGA1_c32880	0.35	+0.2
3,449,702	-		PGA1_c32880	0.36	+0.2
3,449,702	-		PGA1_c32880	0.36	-0.6
3,449,770	+		PGA1_c32880	0.41	-0.7
3,449,780	+		PGA1_c32880	0.42	+0.2
3,449,780	+		PGA1_c32880	0.42	-0.9
3,449,788	-		PGA1_c32880	0.43	-1.3
3,449,853	+		PGA1_c32880	0.48	+0.0
3,449,884	-		PGA1_c32880	0.50	+0.4
3,449,894	+		PGA1_c32880	0.51	+0.0
3,449,894	+		PGA1_c32880	0.51	+1.1
3,449,906	+		PGA1_c32880	0.52	-0.0
3,449,906	+		PGA1_c32880	0.52	-0.4
3,449,906	+		PGA1_c32880	0.52	+0.2
3,449,913	-		PGA1_c32880	0.53	-1.4
3,449,914	-		PGA1_c32880	0.53	+0.4
3,449,921	-		PGA1_c32880	0.53	-0.1
3,450,029	+		PGA1_c32880	0.62	+1.3
3,450,029	+		PGA1_c32880	0.62	-0.9
3,450,239	+		PGA1_c32880	0.79	+0.5
3,450,239	+		PGA1_c32880	0.79	-1.6
3,450,245	+		PGA1_c32880	0.79	-2.1
3,450,245	+		PGA1_c32880	0.79	-2.7
3,450,245	+		PGA1_c32880	0.79	+0.4
3,450,245	+		PGA1_c32880	0.79	-1.0
3,450,247	-		PGA1_c32880	0.79	-0.6
3,450,253	-		PGA1_c32880	0.80	-0.8
3,450,253	-		PGA1_c32880	0.80	+0.8
3,450,263	-		PGA1_c32880	0.80	-0.2
3,450,263	-		PGA1_c32880	0.80	+0.1
3,450,286	-		PGA1_c32880	0.82	-0.5
3,450,286	-		PGA1_c32880	0.82	-0.8
3,450,305	+		PGA1_c32880	0.84	-2.4
3,450,333	-		PGA1_c32880	0.86	+0.3
3,450,369	+		PGA1_c32880	0.89	-0.9
3,450,390	+				-0.9
3,450,390	+				-0.3
3,450,390	+				-2.3
3,450,457	-				-1.5
3,450,471	+				-0.1
3,450,471	+				-1.6
3,450,490	+				+0.2
3,450,508	-				+0.8
3,450,611	-				-1.4
3,450,801	+				-1.6
3,450,806	+				-0.5
3,450,806	+				-0.8
3,450,814	-				-1.5
3,450,814	-				+0.5
3,450,851	-		PGA1_c32900	0.21	-0.6
3,450,874	-		PGA1_c32900	0.36	-0.0
3,450,897	+		PGA1_c32900	0.51	+1.4
3,450,897	+		PGA1_c32900	0.51	-0.1
3,450,897	+		PGA1_c32900	0.51	+0.7
3,450,897	-		PGA1_c32900	0.51	+1.1
3,450,905	-		PGA1_c32900	0.56	-1.4
3,450,905	-		PGA1_c32900	0.56	-2.1
3,450,910	-		PGA1_c32900	0.59	+0.2
3,450,910	-		PGA1_c32900	0.59	+1.1
3,450,910	-		PGA1_c32900	0.59	-0.0
3,451,057	-		PGA1_c32910	0.47	-0.5
3,451,106	+		PGA1_c32910	0.74	+0.9
3,451,108	+		PGA1_c32910	0.75	-0.4
3,451,116	-		PGA1_c32910	0.79	-0.2
3,451,136	-				-2.0
3,451,159	-				-2.0