Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31910

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,345,473	+		PGA1_c31900	0.61	-0.7
3,345,485	+		PGA1_c31900	0.62	-1.0
3,345,497	+		PGA1_c31900	0.63	-0.2
3,345,497	+		PGA1_c31900	0.63	+2.5
3,345,594	-		PGA1_c31900	0.67	+2.1
3,345,629	-		PGA1_c31900	0.69	+0.4
3,345,658	+		PGA1_c31900	0.70	+1.7
3,345,681	+		PGA1_c31900	0.71	+0.0
3,345,681	+		PGA1_c31900	0.71	-0.6
3,345,689	-		PGA1_c31900	0.72	-0.7
3,345,725	+		PGA1_c31900	0.73	-0.4
3,345,819	+		PGA1_c31900	0.78	+0.6
3,345,863	-		PGA1_c31900	0.80	-0.7
3,345,889	+		PGA1_c31900	0.81	-0.7
3,345,904	-		PGA1_c31900	0.82	+0.6
3,345,912	+		PGA1_c31900	0.82	+2.1
3,345,912	+		PGA1_c31900	0.82	+1.1
3,345,928	-		PGA1_c31900	0.83	-1.2
3,345,962	-		PGA1_c31900	0.85	-0.3
3,345,977	+		PGA1_c31900	0.85	+0.1
3,345,998	+		PGA1_c31900	0.86	+0.3
3,345,998	+		PGA1_c31900	0.86	-1.2
3,346,006	-		PGA1_c31900	0.87	+0.5
3,346,006	-		PGA1_c31900	0.87	-1.4
3,346,006	-		PGA1_c31900	0.87	+1.7
3,346,006	-		PGA1_c31900	0.87	+0.1
3,346,044	+		PGA1_c31900	0.89	+0.1
3,346,044	+		PGA1_c31900	0.89	+0.6
3,346,044	+		PGA1_c31900	0.89	-2.3
3,346,052	-		PGA1_c31900	0.89	+0.3
3,346,052	-		PGA1_c31900	0.89	+0.1
3,346,082	-				-0.1
3,346,128	+				+1.7
3,346,198	+				-0.3
3,346,206	-				-1.0
3,346,245	-				-0.2
3,346,279	+				+0.3
3,346,287	-				-1.4
3,346,360	-				+0.4
3,346,365	-				+0.6
3,346,408	-				+1.3
3,346,445	+				+0.3
3,346,471	-				-1.8
3,346,570	+		PGA1_c31910	0.41	-1.3
3,346,593	+		PGA1_c31910	0.49	-0.7
3,346,598	+		PGA1_c31910	0.51	-0.9
3,346,598	+		PGA1_c31910	0.51	-1.4
3,346,601	-		PGA1_c31910	0.52	-0.4
3,346,603	+		PGA1_c31910	0.52	-0.9
3,346,603	+		PGA1_c31910	0.52	-1.4
3,346,603	+		PGA1_c31910	0.52	-3.2
3,346,603	+		PGA1_c31910	0.52	-1.9
3,346,603	+		PGA1_c31910	0.52	-1.2
3,346,603	+		PGA1_c31910	0.52	-0.9
3,346,603	+		PGA1_c31910	0.52	-2.0
3,346,603	+		PGA1_c31910	0.52	-1.7
3,346,603	+		PGA1_c31910	0.52	-2.0
3,346,603	+		PGA1_c31910	0.52	+0.6
3,346,603	+		PGA1_c31910	0.52	-1.3
3,346,603	+		PGA1_c31910	0.52	-0.3
3,346,603	+		PGA1_c31910	0.52	-0.4
3,346,603	+		PGA1_c31910	0.52	+1.1
3,346,606	-		PGA1_c31910	0.53	-1.7
3,346,611	-		PGA1_c31910	0.55	-2.6
3,346,611	-		PGA1_c31910	0.55	-1.0
3,346,611	-		PGA1_c31910	0.55	-1.3
3,346,611	-		PGA1_c31910	0.55	-1.7
3,346,611	-		PGA1_c31910	0.55	+0.5
3,346,611	-		PGA1_c31910	0.55	-1.4
3,346,611	-		PGA1_c31910	0.55	-0.9
3,346,728	-				-0.9
3,346,773	-				+2.3
3,346,803	+				+0.6
3,346,823	-				-1.9
3,346,853	+				-1.2
3,346,853	+				-1.7
3,346,853	+				-0.6
3,346,855	+				+0.0
3,346,861	-				-1.4
3,346,861	-				-1.7
3,346,863	-				-0.9
3,346,893	+				+0.6
3,346,994	-		PGA1_c31920	0.21	+2.5
3,346,996	+		PGA1_c31920	0.21	-1.1
3,347,004	-		PGA1_c31920	0.22	+0.7
3,347,004	-		PGA1_c31920	0.22	+1.4
3,347,029	+		PGA1_c31920	0.27	-1.4
3,347,042	-		PGA1_c31920	0.29	-0.4
3,347,075	-		PGA1_c31920	0.34	-0.2
3,347,095	+		PGA1_c31920	0.38	-0.4
3,347,103	-		PGA1_c31920	0.39	-0.4
3,347,114	+		PGA1_c31920	0.41	+1.7
3,347,166	-		PGA1_c31920	0.50	+1.3
3,347,176	-		PGA1_c31920	0.52	-1.2
3,347,178	+		PGA1_c31920	0.52	+2.5
3,347,201	+		PGA1_c31920	0.56	-0.7
3,347,363	-		PGA1_c31920	0.83	+2.1
3,347,460	+				+1.6
3,347,460	+				+0.0
3,347,463	-				+0.5
3,347,480	+				-0.4
3,347,518	-				-0.3
3,347,569	-				+1.2
3,347,610	+				+1.8
3,347,610	-				+1.0
3,347,669	+				+2.2
3,347,678	-		PGA1_c31930	0.10	+0.1
3,347,679	-		PGA1_c31930	0.11	+0.1
3,347,685	+		PGA1_c31930	0.11	+1.5
3,347,705	+		PGA1_c31930	0.12	+1.5
3,347,705	+		PGA1_c31930	0.12	+0.5
3,347,705	+		PGA1_c31930	0.12	-0.4
3,347,705	+		PGA1_c31930	0.12	+1.4
3,347,705	+		PGA1_c31930	0.12	+1.7
3,347,713	-		PGA1_c31930	0.13	+1.5
3,347,713	-		PGA1_c31930	0.13	+1.1
3,347,727	+		PGA1_c31930	0.14	+2.7
3,347,727	-		PGA1_c31930	0.14	+1.7
3,347,737	+		PGA1_c31930	0.15	+1.5