Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30100

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
3,146,152	+				-1.0
3,146,152	+				-0.9
3,146,160	-				-0.4
3,146,160	-				-0.4
3,146,160	-				+0.3
3,146,160	-				-0.3
3,146,160	-				+1.8
3,146,160	-				+1.6
3,146,167	+				-0.2
3,146,198	+				-1.1
3,146,198	+				-0.3
3,146,198	+				-0.4
3,146,198	+				+0.7
3,146,198	+				-1.4
3,146,198	+				+0.1
3,146,198	+				-0.1
3,146,198	+				+0.2
3,146,198	+				-0.0
3,146,198	+				-2.5
3,146,206	-				+0.0
3,146,206	-				+0.8
3,146,206	-				-0.3
3,146,206	-				-0.0
3,146,206	-				+0.1
3,146,206	-				-0.2
3,146,206	-				-1.5
3,146,206	-				+1.8
3,146,206	-				+0.4
3,146,206	-				-0.2
3,146,206	-				+1.2
3,146,206	-				+1.2
3,146,206	-				+0.1
3,146,206	-				+1.1
3,146,206	-				+0.2
3,146,216	-				+0.6
3,146,246	+				-2.1
3,146,246	+				-1.6
3,146,246	+				-1.3
3,146,246	+				-2.1
3,146,254	-				-0.0
3,146,254	-				+2.1
3,146,254	-				-0.5
3,146,264	-				+0.1
3,146,284	-				+0.1
3,146,337	+		PGA1_c30090	0.16	-1.1
3,146,495	+		PGA1_c30090	0.34	+0.3
3,146,539	+		PGA1_c30090	0.39	-0.4
3,146,548	-		PGA1_c30090	0.40	-1.0
3,146,554	+		PGA1_c30090	0.41	-0.6
3,146,554	+		PGA1_c30090	0.41	-0.1
3,146,554	+		PGA1_c30090	0.41	-0.5
3,146,554	+		PGA1_c30090	0.41	-2.8
3,146,562	-		PGA1_c30090	0.41	-1.9
3,146,562	-		PGA1_c30090	0.41	-1.7
3,146,562	-		PGA1_c30090	0.41	+0.1
3,146,595	+		PGA1_c30090	0.45	-2.1
3,146,634	+		PGA1_c30090	0.50	-0.3
3,146,667	-		PGA1_c30090	0.54	-0.1
3,146,667	-		PGA1_c30090	0.54	-1.2
3,146,694	+		PGA1_c30090	0.57	-0.9
3,146,696	+		PGA1_c30090	0.57	-0.9
3,146,704	+		PGA1_c30090	0.58	-0.4
3,146,715	+		PGA1_c30090	0.59	-3.4
3,146,715	+		PGA1_c30090	0.59	-1.7
3,146,715	+		PGA1_c30090	0.59	-0.2
3,146,715	+		PGA1_c30090	0.59	-1.2
3,146,715	+		PGA1_c30090	0.59	-3.1
3,146,725	+		PGA1_c30090	0.60	-1.3
3,146,733	-		PGA1_c30090	0.61	-1.1
3,146,794	+		PGA1_c30090	0.68	-0.9
3,146,802	-		PGA1_c30090	0.69	-1.1
3,146,804	+		PGA1_c30090	0.69	-1.1
3,146,852	+		PGA1_c30090	0.75	-0.0
3,146,964	+		PGA1_c30090	0.88	-0.4
3,146,972	-		PGA1_c30090	0.89	+0.9
3,147,010	+				-1.7
3,147,010	+				-0.4
3,147,025	-				-2.1
3,147,161	-		PGA1_c30100	0.47	-0.8
3,147,161	-		PGA1_c30100	0.47	-0.4
3,147,161	-		PGA1_c30100	0.47	+1.8
3,147,161	-		PGA1_c30100	0.47	+2.1
3,147,227	-		PGA1_c30100	0.81	+1.7
3,147,257	-				+0.3
3,147,278	-				+1.0
3,147,303	-				+0.6
3,147,562	+		PGA1_c30110	0.39	-2.1
3,147,572	+		PGA1_c30110	0.40	-0.0
3,147,667	+		PGA1_c30110	0.53	-2.1
3,147,675	-		PGA1_c30110	0.55	-0.1
3,147,695	-		PGA1_c30110	0.57	-1.9
3,147,786	-		PGA1_c30110	0.70	+0.1
3,147,865	-		PGA1_c30110	0.81	-0.3
3,147,871	-		PGA1_c30110	0.81	-1.5
3,147,954	+				-0.7
3,147,959	-				+0.1
3,147,959	-				+1.1
3,147,960	+				-1.9
3,148,015	-				-0.9
3,148,025	-				+0.1
3,148,086	-				-0.1
3,148,088	+				-1.0
3,148,109	-				-2.2
3,148,134	-				-0.1
3,148,178	+				+0.4
3,148,231	-		PGA1_c30120	0.13	-2.2
3,148,254	+		PGA1_c30120	0.15	-3.4