Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23630

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
2,463,902	+				-0.8
2,463,910	-				+1.6
2,463,958	-		PGA1_c23620	0.12	+1.0
2,463,959	-		PGA1_c23620	0.12	+2.0
2,463,968	-		PGA1_c23620	0.13	-0.2
2,464,013	+		PGA1_c23620	0.18	+0.3
2,464,098	+		PGA1_c23620	0.28	-1.2
2,464,106	-		PGA1_c23620	0.29	-0.0
2,464,106	-		PGA1_c23620	0.29	+1.6
2,464,114	+		PGA1_c23620	0.30	+1.0
2,464,115	+		PGA1_c23620	0.30	-0.6
2,464,170	-		PGA1_c23620	0.36	-1.2
2,464,220	+		PGA1_c23620	0.42	+1.0
2,464,228	-		PGA1_c23620	0.43	+0.2
2,464,228	-		PGA1_c23620	0.43	+1.2
2,464,356	-		PGA1_c23620	0.57	-1.2
2,464,420	-		PGA1_c23620	0.65	+0.6
2,464,435	+		PGA1_c23620	0.66	-1.5
2,464,440	+				+1.0
2,464,475	-		PGA1_c23620	0.71	-0.3
2,464,485	-		PGA1_c23620	0.72	-1.8
2,464,500	-		PGA1_c23620	0.74	-0.6
2,464,507	-		PGA1_c23620	0.74	-1.6
2,464,507	-		PGA1_c23620	0.74	-0.3
2,464,774	+				+1.6
2,464,803	-				-1.0
2,464,842	+				+1.0
2,464,842	+				-0.0
2,464,869	+				+0.3
2,464,895	-				-0.6
2,464,916	+				+0.4
2,464,924	-				+1.8
2,464,957	+		PGA1_c23630	0.13	-0.6
2,464,959	-		PGA1_c23630	0.13	-1.3
2,464,965	-		PGA1_c23630	0.14	+0.7
2,464,965	-		PGA1_c23630	0.14	+2.8
2,464,965	-		PGA1_c23630	0.14	+0.7
2,465,082	+		PGA1_c23630	0.33	-0.6
2,465,091	-		PGA1_c23630	0.34	+0.6
2,465,098	-		PGA1_c23630	0.35	+1.0
2,465,192	-		PGA1_c23630	0.50	+2.2
2,465,254	+		PGA1_c23630	0.60	-0.6
2,465,254	+		PGA1_c23630	0.60	-1.0
2,465,254	+		PGA1_c23630	0.60	+0.9
2,465,254	+		PGA1_c23630	0.60	+1.3
2,465,254	+		PGA1_c23630	0.60	+1.7
2,465,254	+		PGA1_c23630	0.60	+0.6
2,465,341	+		PGA1_c23630	0.73	-0.1
2,465,349	-		PGA1_c23630	0.75	+3.3
2,465,349	-		PGA1_c23630	0.75	+0.1
2,465,397	+		PGA1_c23630	0.82	+1.0
2,465,397	+		PGA1_c23630	0.82	+2.0
2,465,398	-		PGA1_c23630	0.82	-0.3
2,465,398	-		PGA1_c23630	0.82	+0.4
2,465,441	-		PGA1_c23630	0.89	-1.0
2,465,510	-				+1.9
2,465,530	-				+1.0
2,465,546	+				+0.8
2,465,593	-				-0.0
2,465,657	+				+2.0
2,465,671	+				-0.8
2,465,676	+				+2.0
2,465,684	-				-0.3
2,465,686	+				+3.3
2,465,686	+				-1.4
2,465,694	-				-0.8
2,465,706	+				+0.7
2,465,759	-				+1.0
2,465,767	+				-0.0
2,465,778	+				+2.2
2,465,791	-				+1.0
2,465,792	-				-0.0
2,465,811	-				-0.0
2,465,811	-				+2.0
2,465,821	-				-0.0
2,465,850	-				+1.0
2,465,875	-				-1.3
2,465,917	+				-1.6
2,465,958	-				-0.2
2,466,024	-				-0.0
2,466,037	-				-0.0
2,466,120	-				+3.0
2,466,151	-				-0.6
2,466,196	+				+0.8
2,466,334	-				+1.0
2,466,452	+		PGA1_c23640	0.17	-0.6