Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23260

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
2,413,105	+				+0.5
2,413,106	-				+0.6
2,413,106	-				-0.1
2,413,108	-				+1.3
2,413,114	-				+0.2
2,413,266	+		PGA1_c23250	0.26	+0.1
2,413,266	+		PGA1_c23250	0.26	-0.4
2,413,274	-		PGA1_c23250	0.27	-2.1
2,413,274	-		PGA1_c23250	0.27	-0.1
2,413,302	+		PGA1_c23250	0.30	-2.0
2,413,312	+		PGA1_c23250	0.31	-1.9
2,413,312	+		PGA1_c23250	0.31	-0.7
2,413,312	+		PGA1_c23250	0.31	+1.9
2,413,320	-		PGA1_c23250	0.32	+0.3
2,413,335	-		PGA1_c23250	0.34	-3.0
2,413,389	+		PGA1_c23250	0.41	-0.8
2,413,400	+		PGA1_c23250	0.42	-2.0
2,413,413	+		PGA1_c23250	0.43	+0.3
2,413,421	-		PGA1_c23250	0.44	-2.9
2,413,427	+		PGA1_c23250	0.45	+0.7
2,413,490	+		PGA1_c23250	0.53	-0.1
2,413,498	-		PGA1_c23250	0.54	+0.6
2,413,498	-		PGA1_c23250	0.54	-0.4
2,413,557	+		PGA1_c23250	0.61	-0.2
2,413,565	-		PGA1_c23250	0.62	-2.4
2,413,619	-		PGA1_c23250	0.68	+0.8
2,413,623	+		PGA1_c23250	0.69	+0.2
2,413,623	+		PGA1_c23250	0.69	-0.9
2,413,623	+		PGA1_c23250	0.69	+1.5
2,413,623	+		PGA1_c23250	0.69	-0.3
2,413,623	+		PGA1_c23250	0.69	+0.4
2,413,623	+		PGA1_c23250	0.69	+0.1
2,413,623	+		PGA1_c23250	0.69	-0.1
2,413,623	+		PGA1_c23250	0.69	-0.3
2,413,623	+		PGA1_c23250	0.69	-0.9
2,413,623	+		PGA1_c23250	0.69	-2.5
2,413,623	+		PGA1_c23250	0.69	-0.2
2,413,631	-		PGA1_c23250	0.70	-0.4
2,413,631	-		PGA1_c23250	0.70	+0.8
2,413,631	-		PGA1_c23250	0.70	+0.9
2,413,631	-		PGA1_c23250	0.70	-3.2
2,413,631	-		PGA1_c23250	0.70	+0.1
2,413,657	+		PGA1_c23250	0.73	-0.4
2,413,710	-		PGA1_c23250	0.79	+0.0
2,413,712	+		PGA1_c23250	0.79	-1.1
2,413,713	-		PGA1_c23250	0.79	+0.6
2,413,714	+		PGA1_c23250	0.79	+0.9
2,413,720	-		PGA1_c23250	0.80	+2.5
2,413,721	-		PGA1_c23250	0.80	+2.6
2,413,731	+		PGA1_c23250	0.81	-0.2
2,413,822	-				-1.9
2,413,832	+				-1.1
2,413,835	-				+0.1
2,413,864	+				-0.4
2,413,896	+				+1.4
2,413,903	+				-1.7
2,413,904	-				+1.2
2,413,911	-				+1.5
2,413,911	-				+0.9
2,413,911	-				+0.7
2,413,915	+				+1.5
2,413,951	-				-0.6
2,413,951	-				-1.7
2,413,958	+				+1.3
2,413,958	+				+0.6
2,413,966	-				-0.2
2,413,966	-				+0.8
2,414,044	+				-0.1
2,414,066	+				+0.7
2,414,066	+				+0.9
2,414,081	+				-0.1
2,414,105	+				+0.9
2,414,130	-				+0.1
2,414,137	+				+0.4
2,414,145	-				+0.8
2,414,191	+				+0.9
2,414,214	+		PGA1_c23260	0.12	-0.5
2,414,214	+		PGA1_c23260	0.12	+1.5
2,414,217	-		PGA1_c23260	0.12	+0.9
2,414,217	-		PGA1_c23260	0.12	+0.2
2,414,272	-		PGA1_c23260	0.18	-0.6
2,414,284	+		PGA1_c23260	0.19	-0.8
2,414,303	-		PGA1_c23260	0.21	+0.7
2,414,317	+		PGA1_c23260	0.23	+0.5
2,414,317	+		PGA1_c23260	0.23	-0.1
2,414,317	+		PGA1_c23260	0.23	+0.1
2,414,325	-		PGA1_c23260	0.24	-0.7
2,414,328	-		PGA1_c23260	0.24	-0.3
2,414,328	-		PGA1_c23260	0.24	-0.2
2,414,330	-		PGA1_c23260	0.24	-0.1
2,414,335	+		PGA1_c23260	0.25	+0.9
2,414,341	+		PGA1_c23260	0.25	-0.3
2,414,394	+		PGA1_c23260	0.31	-0.3
2,414,407	+		PGA1_c23260	0.32	+0.5
2,414,449	+		PGA1_c23260	0.37	+0.5
2,414,458	-		PGA1_c23260	0.38	+0.5
2,414,471	-		PGA1_c23260	0.39	-0.5
2,414,486	-		PGA1_c23260	0.41	-0.6
2,414,504	+		PGA1_c23260	0.42	+0.0
2,414,512	-		PGA1_c23260	0.43	-0.7
2,414,512	-		PGA1_c23260	0.43	-2.2
2,414,512	-		PGA1_c23260	0.43	+0.3
2,414,524	+		PGA1_c23260	0.45	+0.2
2,414,534	+		PGA1_c23260	0.46	+0.1
2,414,542	-		PGA1_c23260	0.46	+0.6
2,414,577	+		PGA1_c23260	0.50	-2.4
2,414,709	+		PGA1_c23260	0.64	-0.5
2,414,724	+		PGA1_c23260	0.66	-0.8
2,414,724	+		PGA1_c23260	0.66	+1.6
2,414,767	+		PGA1_c23260	0.70	+0.6
2,414,772	+		PGA1_c23260	0.71	-0.6
2,414,780	-		PGA1_c23260	0.72	+2.1
2,414,782	+		PGA1_c23260	0.72	-0.2
2,414,782	+		PGA1_c23260	0.72	+0.1
2,414,782	+		PGA1_c23260	0.72	-0.1
2,414,782	+		PGA1_c23260	0.72	+0.7
2,414,782	+		PGA1_c23260	0.72	+2.1
2,414,782	+		PGA1_c23260	0.72	+0.5
2,414,782	+		PGA1_c23260	0.72	+0.0
2,414,782	+		PGA1_c23260	0.72	-2.1
2,414,782	+		PGA1_c23260	0.72	-0.7
2,414,782	+		PGA1_c23260	0.72	-0.7
2,414,782	+		PGA1_c23260	0.72	+0.2
2,414,782	+		PGA1_c23260	0.72	+1.6
2,414,787	+		PGA1_c23260	0.72	-1.9
2,414,790	-		PGA1_c23260	0.73	-0.7
2,414,790	-		PGA1_c23260	0.73	+1.1
2,414,790	-		PGA1_c23260	0.73	+0.2
2,414,790	-		PGA1_c23260	0.73	+1.9
2,414,790	-		PGA1_c23260	0.73	+0.9
2,414,790	-		PGA1_c23260	0.73	-0.1
2,414,790	-		PGA1_c23260	0.73	+0.6
2,414,790	-		PGA1_c23260	0.73	+1.0
2,414,790	-		PGA1_c23260	0.73	+0.8
2,414,790	-		PGA1_c23260	0.73	+1.1
2,414,790	-		PGA1_c23260	0.73	+0.9
2,414,790	-		PGA1_c23260	0.73	-0.8
2,414,790	-		PGA1_c23260	0.73	+0.5
2,414,790	-		PGA1_c23260	0.73	+0.9
2,414,790	-		PGA1_c23260	0.73	+0.4
2,414,790	-		PGA1_c23260	0.73	+2.2
2,414,790	-		PGA1_c23260	0.73	+1.2
2,414,790	-		PGA1_c23260	0.73	-0.7
2,414,790	-		PGA1_c23260	0.73	-0.9
2,414,790	-		PGA1_c23260	0.73	+1.5
2,414,795	-		PGA1_c23260	0.73	+0.8
2,414,813	-		PGA1_c23260	0.75	+0.9
2,414,840	-		PGA1_c23260	0.78	-0.1
2,414,855	-		PGA1_c23260	0.79	-1.7
2,414,862	-		PGA1_c23260	0.80	+0.8
2,414,890	+		PGA1_c23260	0.83	-0.4
2,414,963	+				+0.9
2,414,963	+				+0.8
2,414,999	+				-0.7
2,415,030	-				-0.4
2,415,057	+				-0.0
2,415,057	+				-0.1
2,415,065	-				+0.7
2,415,065	-				-1.4
2,415,148	+				-0.2
2,415,148	+				+0.5
2,415,156	-				-0.4
2,415,195	+				+0.1
2,415,241	-				-1.4
2,415,248	-				-1.1
2,415,273	+		PGA1_c23270	0.11	+2.5
2,415,273	+		PGA1_c23270	0.11	+0.6
2,415,302	+		PGA1_c23270	0.14	+0.0
2,415,371	-		PGA1_c23270	0.21	-2.2
2,415,411	+		PGA1_c23270	0.25	+1.5
2,415,419	+		PGA1_c23270	0.26	-0.7
2,415,443	+		PGA1_c23270	0.28	+0.9
2,415,443	+		PGA1_c23270	0.28	-1.1
2,415,520	+		PGA1_c23270	0.35	+1.2
2,415,558	-		PGA1_c23270	0.39	-0.4
2,415,558	-		PGA1_c23270	0.39	+2.2
2,415,558	-		PGA1_c23270	0.39	+0.6
2,415,563	-		PGA1_c23270	0.40	-0.3
2,415,587	+		PGA1_c23270	0.42	+0.1
2,415,611	+		PGA1_c23270	0.44	-0.4
2,415,618	-		PGA1_c23270	0.45	+0.1
2,415,664	-		PGA1_c23270	0.49	-1.0
2,415,803	-		PGA1_c23270	0.63	-0.8
2,415,835	+		PGA1_c23270	0.66	-0.3
2,415,896	+		PGA1_c23270	0.72	-0.1
2,415,970	+		PGA1_c23270	0.79	+1.6
2,415,977	-		PGA1_c23270	0.80	-0.2
2,415,978	-		PGA1_c23270	0.80	-0.9
2,416,014	+		PGA1_c23270	0.83	-1.4
2,416,014	+		PGA1_c23270	0.83	-0.8
2,416,019	+		PGA1_c23270	0.84	-0.5
2,416,022	-		PGA1_c23270	0.84	+0.1
2,416,024	-		PGA1_c23270	0.84	+1.3
2,416,027	-		PGA1_c23270	0.84	+0.1