Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20610

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
2,135,069	+		PGA1_c20590	0.39	+0.3
2,135,111	+		PGA1_c20590	0.54	+1.6
2,135,111	+		PGA1_c20590	0.54	-0.6
2,135,111	+		PGA1_c20590	0.54	+0.3
2,135,111	+		PGA1_c20590	0.54	-1.6
2,135,111	+		PGA1_c20590	0.54	-0.5
2,135,119	-		PGA1_c20590	0.57	+0.9
2,135,119	-		PGA1_c20590	0.57	-2.1
2,135,119	-		PGA1_c20590	0.57	-0.9
2,135,207	-		PGA1_c20590	0.89	-1.7
2,135,244	+				+0.6
2,135,293	+				-0.1
2,135,301	-				+0.2
2,135,487	-		PGA1_c20600	0.24	-0.8
2,135,504	-		PGA1_c20600	0.26	+0.1
2,135,590	-		PGA1_c20600	0.39	-0.4
2,135,595	+		PGA1_c20600	0.40	-0.8
2,135,613	+		PGA1_c20600	0.42	+0.1
2,135,670	+		PGA1_c20600	0.51	+1.1
2,135,726	+		PGA1_c20600	0.59	-1.0
2,135,734	-		PGA1_c20600	0.60	-1.9
2,135,741	+		PGA1_c20600	0.61	+1.0
2,135,749	-		PGA1_c20600	0.62	-1.5
2,135,767	-		PGA1_c20600	0.65	-0.9
2,135,782	+		PGA1_c20600	0.67	+0.0
2,135,936	-				-1.2
2,135,938	+				+0.5
2,135,946	-				-0.3
2,136,009	+				+0.6
2,136,109	+				-1.0
2,136,109	+				-0.1
2,136,109	+				-0.9
2,136,109	+				-1.1
2,136,117	-				+1.1
2,136,166	+		PGA1_c20610	0.14	+0.4
2,136,168	+		PGA1_c20610	0.14	+0.7
2,136,168	+		PGA1_c20610	0.14	-1.9
2,136,168	+		PGA1_c20610	0.14	+0.3
2,136,168	+		PGA1_c20610	0.14	-0.7
2,136,168	+		PGA1_c20610	0.14	-1.1
2,136,176	-		PGA1_c20610	0.15	+0.3
2,136,273	-		PGA1_c20610	0.23	-1.8
2,136,275	+		PGA1_c20610	0.23	+0.1
2,136,283	-		PGA1_c20610	0.23	-0.4
2,136,283	-		PGA1_c20610	0.23	+1.2
2,136,290	-		PGA1_c20610	0.24	-0.5
2,136,404	+		PGA1_c20610	0.33	+1.7
2,136,409	+		PGA1_c20610	0.34	+1.4
2,136,412	-		PGA1_c20610	0.34	-0.8
2,136,412	-		PGA1_c20610	0.34	-0.8
2,136,489	+		PGA1_c20610	0.40	+0.0
2,136,494	+		PGA1_c20610	0.41	-0.2
2,136,509	+		PGA1_c20610	0.42	-0.5
2,136,595	+		PGA1_c20610	0.49	-0.1
2,136,634	+		PGA1_c20610	0.52	-0.4
2,136,634	+		PGA1_c20610	0.52	+0.9
2,136,635	+		PGA1_c20610	0.52	-0.7
2,136,719	-		PGA1_c20610	0.59	-0.6
2,136,720	-		PGA1_c20610	0.59	-1.5
2,136,746	-		PGA1_c20610	0.62	-1.9
2,136,835	-		PGA1_c20610	0.69	-1.0
2,136,866	+		PGA1_c20610	0.72	-1.1
2,136,900	-		PGA1_c20610	0.74	-0.1
2,136,972	+		PGA1_c20610	0.80	-0.1
2,136,982	+		PGA1_c20610	0.81	-0.4
2,136,982	+		PGA1_c20610	0.81	-1.5
2,136,990	-		PGA1_c20610	0.82	+0.9
2,137,007	-		PGA1_c20610	0.83	+0.1
2,137,016	-		PGA1_c20610	0.84	-0.3
2,137,034	+		PGA1_c20610	0.85	-1.5
2,137,034	+		PGA1_c20610	0.85	-0.6
2,137,039	+		PGA1_c20610	0.86	+0.1
2,137,042	+		PGA1_c20610	0.86	+0.7
2,137,042	-		PGA1_c20610	0.86	-0.9
2,137,042	-		PGA1_c20610	0.86	-0.1
2,137,042	-		PGA1_c20610	0.86	+0.9
2,137,042	-		PGA1_c20610	0.86	+0.3
2,137,050	-		PGA1_c20610	0.87	+0.0
2,137,055	+		PGA1_c20610	0.87	+1.0
2,137,055	+		PGA1_c20610	0.87	-1.3
2,137,071	+		PGA1_c20610	0.88	-1.1
2,137,132	+				+0.9
2,137,140	-				+1.6
2,137,228	+				-1.9
2,137,236	-				-1.0
2,137,236	-				-0.7
2,137,236	-				-0.7
2,137,236	-				+0.9
2,137,236	-				+0.5
2,137,236	-				-0.7
2,137,238	-				+1.2
2,137,274	+				-2.5
2,137,282	-				-0.6
2,137,351	-				-1.9
2,137,838	-				+0.3
2,137,875	+				-0.3
2,137,888	-				-0.4
2,137,889	-				+0.3
2,137,918	+				+0.1
2,137,918	+				+0.7
2,137,926	-				-2.6
2,137,926	-				+0.7
2,137,926	-				-2.3
2,137,926	-				-1.5
2,137,926	-				+0.5
2,137,969	-				+0.2
2,137,972	+				+0.9
2,137,980	-				+0.3
2,137,980	-				-0.1
2,137,980	-				-0.8
2,137,982	+				-0.7
2,137,996	-				-0.3
2,138,041	+				-0.1
2,138,115	+				-0.1
2,138,115	+				+0.1
2,138,115	+				+0.9
2,138,121	-				-0.5
2,138,123	-				-0.7
2,138,123	-				+1.2
2,138,162	+				+0.1
2,138,172	-				+0.9
2,138,172	-				+1.5
2,138,179	+				+0.9
2,138,179	+				+0.8
2,138,184	+				-1.3
2,138,187	-				-0.8
2,138,187	-				+0.5
2,138,187	-				+1.5
2,138,187	-				-1.2
2,138,197	-				+0.7
2,138,197	-				+1.9