Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20130

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
2,086,633	+				-0.2
2,086,634	+				-0.6
2,086,683	+				+1.4
2,086,691	-				+1.4
2,086,691	-				+1.8
2,086,691	-				-1.5
2,086,691	-				+0.8
2,086,713	-				-0.2
2,086,713	-				+1.2
2,086,739	+				+1.2
2,086,751	-				-1.1
2,086,772	+				+1.2
2,086,780	-				-0.2
2,086,780	-				-0.2
2,086,790	-				+0.2
2,086,818	+				-1.8
2,086,818	+				-1.2
2,086,826	-				+0.8
2,086,826	-				-0.2
2,086,828	-				-0.2
2,086,953	-				-1.5
2,086,998	-				+0.8
2,087,005	+				-0.5
2,087,009	+				-1.5
2,087,013	-				+0.4
2,087,047	+				-2.0
2,087,055	-				+1.4
2,087,074	-		PGA1_c20120	0.10	+0.8
2,087,105	+		PGA1_c20120	0.17	+1.4
2,087,105	+		PGA1_c20120	0.17	+1.6
2,087,105	+		PGA1_c20120	0.17	-1.2
2,087,105	+		PGA1_c20120	0.17	+1.6
2,087,113	-		PGA1_c20120	0.19	+1.8
2,087,113	-		PGA1_c20120	0.19	+0.8
2,087,114	-		PGA1_c20120	0.19	+0.1
2,087,133	+		PGA1_c20120	0.23	+0.2
2,087,163	+		PGA1_c20120	0.29	+2.4
2,087,180	-		PGA1_c20120	0.33	+1.2
2,087,236	-		PGA1_c20120	0.45	+0.8
2,087,317	+		PGA1_c20120	0.62	+0.2
2,087,383	-		PGA1_c20120	0.76	+0.8
2,087,383	-		PGA1_c20120	0.76	-0.2
2,087,423	-		PGA1_c20120	0.85	+0.0
2,087,547	+				+0.7
2,087,627	+				+0.3
2,087,681	-		PGA1_c20130	0.14	-0.6
2,087,720	+		PGA1_c20130	0.23	+1.4
2,087,720	+		PGA1_c20130	0.23	+0.2
2,087,728	-		PGA1_c20130	0.25	+1.8
2,087,764	+		PGA1_c20130	0.33	-0.7
2,087,859	+		PGA1_c20130	0.55	+0.3
2,087,911	+		PGA1_c20130	0.67	-1.3
2,087,911	+		PGA1_c20130	0.67	-1.3
2,087,977	-		PGA1_c20130	0.82	-0.7
2,087,986	-		PGA1_c20130	0.84	-1.2
2,087,988	-		PGA1_c20130	0.85	-0.7
2,088,005	-		PGA1_c20130	0.89	+0.4
2,088,005	-		PGA1_c20130	0.89	-0.5
2,088,017	+				-1.5
2,088,029	+				+2.8
2,088,071	+				-1.0
2,088,091	+				+1.8
2,088,158	-				+0.8
2,088,192	-				+0.3
2,088,296	+				-0.2
2,088,296	+				+0.3
2,088,296	+				+0.6
2,088,299	+				+2.8
2,088,317	+				+1.0
2,088,317	+				+2.2
2,088,325	-				+0.8
2,088,356	+		PGA1_c20140	0.11	+1.4
2,088,366	+		PGA1_c20140	0.12	-2.0
2,088,374	-		PGA1_c20140	0.13	+0.8
2,088,374	-		PGA1_c20140	0.13	+1.9
2,088,387	-		PGA1_c20140	0.15	+1.4
2,088,387	-		PGA1_c20140	0.15	+0.6
2,088,387	-		PGA1_c20140	0.15	+2.2
2,088,387	-		PGA1_c20140	0.15	+1.6
2,088,443	-		PGA1_c20140	0.21	+2.8
2,088,541	+		PGA1_c20140	0.33	+2.4
2,088,593	-		PGA1_c20140	0.40	+1.2
2,088,599	+		PGA1_c20140	0.40	+1.4
2,088,609	+		PGA1_c20140	0.42	+1.7
2,088,617	-		PGA1_c20140	0.43	+1.6
2,088,790	+		PGA1_c20140	0.64	+1.2
2,088,790	-		PGA1_c20140	0.64	+3.4
2,088,875	+		PGA1_c20140	0.74	+2.0
2,088,883	-		PGA1_c20140	0.75	-1.5
2,088,900	+		PGA1_c20140	0.77	+1.7
2,088,908	-		PGA1_c20140	0.78	+1.3
2,088,910	+		PGA1_c20140	0.78	+1.5
2,088,943	+		PGA1_c20140	0.82	+0.1
2,088,953	-		PGA1_c20140	0.83	+0.8
2,089,016	+				+2.1