Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17900

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
1,870,797	-				+0.4
1,870,805	-				-0.5
1,870,815	+				-0.5
1,870,815	+				-0.3
1,870,823	-				-1.0
1,870,872	-				-0.2
1,870,876	-				-2.5
1,870,876	-				-0.8
1,870,878	-				+0.7
1,870,900	-				+0.4
1,870,915	-				+0.5
1,870,972	+				+1.1
1,870,972	+				+1.4
1,870,980	-				+0.7
1,870,980	-				-0.7
1,871,063	+				+0.4
1,871,063	+				+0.8
1,871,071	-				+0.2
1,871,071	-				-0.2
1,871,071	-				-0.4
1,871,093	-		PGA1_c17900	0.10	+1.1
1,871,093	-		PGA1_c17900	0.10	+1.4
1,871,093	-		PGA1_c17900	0.10	+0.6
1,871,093	-		PGA1_c17900	0.10	+1.8
1,871,093	-		PGA1_c17900	0.10	+1.1
1,871,136	+		PGA1_c17900	0.14	-1.5
1,871,187	+		PGA1_c17900	0.19	+0.5
1,871,192	+		PGA1_c17900	0.20	+1.7
1,871,194	-		PGA1_c17900	0.20	+0.7
1,871,202	+		PGA1_c17900	0.21	+0.1
1,871,332	+		PGA1_c17900	0.34	+1.8
1,871,332	+		PGA1_c17900	0.34	-0.8
1,871,332	+		PGA1_c17900	0.34	+1.6
1,871,332	+		PGA1_c17900	0.34	+0.6
1,871,332	+		PGA1_c17900	0.34	+1.1
1,871,332	+		PGA1_c17900	0.34	-0.0
1,871,340	-		PGA1_c17900	0.34	+0.2
1,871,340	-		PGA1_c17900	0.34	-0.9
1,871,340	-		PGA1_c17900	0.34	+0.4
1,871,340	-		PGA1_c17900	0.34	+1.8
1,871,340	-		PGA1_c17900	0.34	-0.4
1,871,478	+		PGA1_c17900	0.48	-1.7
1,871,602	+		PGA1_c17900	0.60	+1.8
1,871,607	+		PGA1_c17900	0.61	+0.5
1,871,634	-		PGA1_c17900	0.63	+1.3
1,871,679	+		PGA1_c17900	0.68	-0.8
1,871,725	-		PGA1_c17900	0.72	+0.2
1,871,725	-		PGA1_c17900	0.72	+1.4
1,871,725	-		PGA1_c17900	0.72	+0.9
1,871,761	+		PGA1_c17900	0.76	+0.5
1,871,761	+		PGA1_c17900	0.76	+0.3
1,871,761	+		PGA1_c17900	0.76	+0.8
1,871,766	+		PGA1_c17900	0.76	-0.8
1,871,774	-		PGA1_c17900	0.77	+0.0
1,871,784	-		PGA1_c17900	0.78	+0.8
1,871,805	-		PGA1_c17900	0.80	-2.0
1,871,805	-		PGA1_c17900	0.80	-1.5
1,871,823	+		PGA1_c17900	0.82	+2.0
1,871,833	+		PGA1_c17900	0.83	+3.1
1,871,833	+		PGA1_c17900	0.83	-0.6
1,871,833	+		PGA1_c17900	0.83	-2.1
1,871,833	+		PGA1_c17900	0.83	-1.4
1,871,833	+		PGA1_c17900	0.83	+2.4
1,871,833	+		PGA1_c17900	0.83	-0.4
1,871,833	+		PGA1_c17900	0.83	-3.1
1,871,834	+		PGA1_c17900	0.83	-0.2
1,871,834	+		PGA1_c17900	0.83	+0.7
1,871,834	+		PGA1_c17900	0.83	+0.1
1,871,842	-		PGA1_c17900	0.84	-0.2
1,871,842	-		PGA1_c17900	0.84	-1.5
1,872,001	-				-0.8
1,872,061	-				+2.4
1,872,064	-				-1.1
1,872,078	-				-0.1
1,872,078	-				-0.8
1,872,134	+				+1.0
1,872,137	-				-1.5
1,872,160	+				+0.3
1,872,168	-				+0.2
1,872,192	-				+0.6
1,872,192	-				-1.5
1,872,221	+				-0.4
1,872,223	-				+1.1
1,872,258	-				+0.8
1,872,275	+				+0.6
1,872,306	-				-0.6
1,872,306	-				+1.4
1,872,333	+		PGA1_c17910	0.13	-1.8
1,872,385	+		PGA1_c17910	0.20	-0.2
1,872,387	+		PGA1_c17910	0.20	-1.6
1,872,391	-		PGA1_c17910	0.21	-0.0
1,872,426	-		PGA1_c17910	0.25	+1.8
1,872,430	-		PGA1_c17910	0.26	+2.1
1,872,523	+		PGA1_c17910	0.38	-0.6
1,872,542	+		PGA1_c17910	0.41	+0.8
1,872,543	-		PGA1_c17910	0.41	-0.5
1,872,580	+		PGA1_c17910	0.46	+1.1
1,872,580	+		PGA1_c17910	0.46	-0.5
1,872,588	-		PGA1_c17910	0.47	-0.2
1,872,712	+		PGA1_c17910	0.64	+0.2
1,872,899	-		PGA1_c17910	0.89	+1.4
1,872,931	-				-1.5
1,872,941	-				-0.8
1,872,965	-				-1.5
1,872,968	+				+1.5