Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17630

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
1,847,371	+		PGA1_c17620	0.30	+2.8
1,847,411	-		PGA1_c17620	0.34	+1.8
1,847,416	-		PGA1_c17620	0.34	+1.0
1,847,509	+		PGA1_c17620	0.42	+3.1
1,847,509	+		PGA1_c17620	0.42	-0.2
1,847,527	-		PGA1_c17620	0.44	-0.5
1,847,527	-		PGA1_c17620	0.44	+1.2
1,847,534	+		PGA1_c17620	0.44	+0.1
1,847,579	-		PGA1_c17620	0.48	+1.2
1,847,614	-		PGA1_c17620	0.51	+1.8
1,847,630	+		PGA1_c17620	0.52	+0.8
1,847,630	+		PGA1_c17620	0.52	+0.8
1,847,638	-		PGA1_c17620	0.53	+0.8
1,847,638	-		PGA1_c17620	0.53	+0.6
1,847,675	-		PGA1_c17620	0.56	+0.3
1,847,677	+		PGA1_c17620	0.56	-1.0
1,847,677	+		PGA1_c17620	0.56	-1.2
1,847,685	-		PGA1_c17620	0.57	+0.8
1,847,685	-		PGA1_c17620	0.57	+0.2
1,847,685	-		PGA1_c17620	0.57	+0.2
1,847,685	-		PGA1_c17620	0.57	+0.5
1,847,685	-		PGA1_c17620	0.57	-0.5
1,847,703	+		PGA1_c17620	0.58	-0.2
1,847,703	+		PGA1_c17620	0.58	-0.0
1,847,793	+		PGA1_c17620	0.66	+0.1
1,847,816	-		PGA1_c17620	0.68	+0.8
1,847,855	+		PGA1_c17620	0.71	+1.8
1,847,855	+		PGA1_c17620	0.71	-0.6
1,848,013	+		PGA1_c17620	0.84	+1.5
1,848,013	-		PGA1_c17620	0.84	+0.5
1,848,083	+				+0.8
1,848,083	+				-1.5
1,848,091	-				-1.5
1,848,116	+				-0.5
1,848,134	-				+1.6
1,848,218	+				+1.1
1,848,304	-				+1.0
1,848,304	-				-0.6
1,848,396	+		PGA1_c17630	0.15	+0.2
1,848,396	+		PGA1_c17630	0.15	+2.8
1,848,401	-		PGA1_c17630	0.16	+2.4
1,848,403	+		PGA1_c17630	0.16	-1.2
1,848,407	+		PGA1_c17630	0.17	+1.2
1,848,411	-		PGA1_c17630	0.18	-1.4
1,848,415	+		PGA1_c17630	0.18	-0.8
1,848,415	+		PGA1_c17630	0.18	+0.8
1,848,423	-		PGA1_c17630	0.19	+1.2
1,848,455	-		PGA1_c17630	0.24	+0.6
1,848,495	+		PGA1_c17630	0.30	+0.1
1,848,495	+		PGA1_c17630	0.30	-0.6
1,848,500	+				+0.8
1,848,514	-		PGA1_c17630	0.32	+2.4
1,848,538	+		PGA1_c17630	0.36	+0.8
1,848,642	+		PGA1_c17630	0.51	+0.1
1,848,650	-		PGA1_c17630	0.52	+0.5
1,848,652	+		PGA1_c17630	0.52	+1.1
1,848,652	+		PGA1_c17630	0.52	+3.4
1,848,659	+		PGA1_c17630	0.53	+0.8
1,848,707	-		PGA1_c17630	0.60	+1.8
1,848,707	-		PGA1_c17630	0.60	+1.1
1,848,707	-		PGA1_c17630	0.60	+1.3
1,848,707	-		PGA1_c17630	0.60	+0.6
1,848,726	-		PGA1_c17630	0.63	+0.2
1,848,752	-		PGA1_c17630	0.67	+1.9
1,848,784	+		PGA1_c17630	0.72	-1.5
1,848,819	-		PGA1_c17630	0.77	+2.4
1,848,929	+				+0.2
1,848,929	+				+0.8
1,848,937	-				-0.2
1,849,058	+				-1.4
1,849,067	-				+1.6
1,849,067	-				-0.2
1,849,077	-		PGA1_c17640	0.12	+0.8
1,849,215	+		PGA1_c17640	0.51	+3.1
1,849,235	-		PGA1_c17640	0.56	+2.2
1,849,288	+		PGA1_c17640	0.71	+1.5
1,849,297	-		PGA1_c17640	0.74	-1.2
1,849,341	+		PGA1_c17640	0.86	-1.8
1,849,341	+		PGA1_c17640	0.86	+0.5
1,849,349	-		PGA1_c17640	0.89	-0.5
1,849,349	-		PGA1_c17640	0.89	+1.0
1,849,349	-		PGA1_c17640	0.89	+0.8
1,849,349	-		PGA1_c17640	0.89	+0.8
1,849,349	-		PGA1_c17640	0.89	-0.2
1,849,349	-		PGA1_c17640	0.89	+0.3
1,849,349	-		PGA1_c17640	0.89	+0.1
1,849,349	-		PGA1_c17640	0.89	+1.4
1,849,371	-				+1.8
1,849,381	-				+2.4
1,849,381	-				+0.8
1,849,466	-		PGA1_c17650	0.11	-0.8
1,849,503	+		PGA1_c17650	0.25	+2.4
1,849,507	-		PGA1_c17650	0.26	-0.2
1,849,511	-		PGA1_c17650	0.28	+3.1
1,849,511	-		PGA1_c17650	0.28	+0.8
1,849,535	-		PGA1_c17650	0.36	-0.5
1,849,565	+		PGA1_c17650	0.47	-0.8
1,849,565	+		PGA1_c17650	0.47	-2.0
1,849,615	-		PGA1_c17650	0.65	-1.5
1,849,683	+		PGA1_c17650	0.89	-0.8
1,849,683	+		PGA1_c17650	0.89	+1.5
1,849,687	-				-1.5
1,849,687	-				+1.2
1,849,690	+				-0.2
1,849,720	-				+2.1
1,849,766	-				+1.1
1,849,903	+				+0.5
1,849,919	-				+1.5
1,849,936	+				+2.4
1,849,936	+				+2.6
1,849,936	+				-0.8
1,849,936	+				+1.2
1,849,936	+				+0.1
1,849,936	+				+0.5
1,849,936	+				-1.2
1,849,936	+				+2.4
1,849,944	-				+0.2
1,849,944	-				+0.8
1,849,944	-				+2.1
1,849,944	-				-0.4
1,849,972	+				+1.8