Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16720

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
1,739,685	+		PGA1_c16710	0.24	-0.5
1,739,693	-		PGA1_c16710	0.24	+1.4
1,739,715	+		PGA1_c16710	0.26	+1.7
1,739,723	-		PGA1_c16710	0.27	+1.2
1,739,798	-		PGA1_c16710	0.33	+1.1
1,739,865	-		PGA1_c16710	0.38	-0.3
1,739,867	-		PGA1_c16710	0.38	-0.4
1,739,980	-		PGA1_c16710	0.47	+0.2
1,739,993	-		PGA1_c16710	0.48	+0.5
1,740,002	-		PGA1_c16710	0.49	+0.6
1,740,012	-		PGA1_c16710	0.50	-1.1
1,740,030	+		PGA1_c16710	0.51	+0.1
1,740,137	-		PGA1_c16710	0.60	+0.1
1,740,161	-		PGA1_c16710	0.62	+1.7
1,740,181	+		PGA1_c16710	0.63	-0.7
1,740,240	-		PGA1_c16710	0.68	+0.2
1,740,274	-		PGA1_c16710	0.71	+1.3
1,740,334	+		PGA1_c16710	0.75	-0.7
1,740,344	+		PGA1_c16710	0.76	+1.1
1,740,461	-		PGA1_c16710	0.85	-0.1
1,740,461	-		PGA1_c16710	0.85	-0.5
1,740,528	+				+0.4
1,740,546	-				-0.5
1,740,602	+				+0.9
1,740,602	+				-0.1
1,740,710	+				+0.9
1,740,745	-				-0.8
1,740,747	+				-0.7
1,740,782	+				+0.6
1,740,816	+		PGA1_c16720	0.11	-2.1
1,740,816	+		PGA1_c16720	0.11	+0.5
1,740,816	+		PGA1_c16720	0.11	+1.3
1,740,816	+		PGA1_c16720	0.11	+2.4
1,740,816	+		PGA1_c16720	0.11	+1.9
1,740,824	-		PGA1_c16720	0.12	+0.9
1,740,848	-		PGA1_c16720	0.14	+1.2
1,740,865	+		PGA1_c16720	0.16	+1.0
1,740,865	+		PGA1_c16720	0.16	+0.5
1,740,953	-		PGA1_c16720	0.23	-1.1
1,740,981	+		PGA1_c16720	0.26	+0.3
1,741,048	+		PGA1_c16720	0.32	+0.4
1,741,086	+		PGA1_c16720	0.35	+0.9
1,741,086	+		PGA1_c16720	0.35	-0.9
1,741,157	-		PGA1_c16720	0.41	+1.9
1,741,261	+		PGA1_c16720	0.50	-1.5
1,741,289	+		PGA1_c16720	0.52	-0.5
1,741,289	+		PGA1_c16720	0.52	-3.0
1,741,289	+		PGA1_c16720	0.52	-1.1
1,741,289	+		PGA1_c16720	0.52	+1.6
1,741,297	-		PGA1_c16720	0.53	+0.3
1,741,297	-		PGA1_c16720	0.53	-1.7
1,741,317	-		PGA1_c16720	0.55	+0.1
1,741,385	-		PGA1_c16720	0.61	-0.7
1,741,401	+		PGA1_c16720	0.62	-0.7
1,741,409	-		PGA1_c16720	0.63	+1.3
1,741,448	+		PGA1_c16720	0.66	-0.4
1,741,459	+		PGA1_c16720	0.67	+0.1
1,741,511	+		PGA1_c16720	0.72	-0.9
1,741,519	-		PGA1_c16720	0.72	+0.4
1,741,532	-		PGA1_c16720	0.74	+0.4
1,741,558	+		PGA1_c16720	0.76	+1.7
1,741,558	+		PGA1_c16720	0.76	+0.6
1,741,566	-		PGA1_c16720	0.76	-0.3
1,741,594	+		PGA1_c16720	0.79	+1.2
1,741,602	-		PGA1_c16720	0.80	+0.4
1,741,608	-		PGA1_c16720	0.80	+1.6
1,741,620	+		PGA1_c16720	0.81	+0.9
1,741,625	+		PGA1_c16720	0.82	+0.1
1,741,633	-		PGA1_c16720	0.82	+0.4
1,741,675	+		PGA1_c16720	0.86	-0.7
1,741,683	-		PGA1_c16720	0.87	+1.1
1,741,683	-		PGA1_c16720	0.87	+1.9
1,741,722	+				+0.3
1,741,722	+				+0.9
1,741,730	-				-0.9
1,741,730	-				+0.9
1,741,736	+				-0.9
1,741,851	+				-0.7
1,741,911	-		PGA1_c16730	0.11	+1.1
1,741,947	-		PGA1_c16730	0.16	+0.9
1,742,005	+		PGA1_c16730	0.24	-0.1
1,742,018	-		PGA1_c16730	0.25	+0.7
1,742,039	-		PGA1_c16730	0.28	-0.1
1,742,120	+		PGA1_c16730	0.39	-0.0
1,742,125	+		PGA1_c16730	0.40	+0.3
1,742,133	-		PGA1_c16730	0.41	+0.6
1,742,138	-		PGA1_c16730	0.41	-2.3
1,742,138	-		PGA1_c16730	0.41	-1.0
1,742,180	+		PGA1_c16730	0.47	-0.3
1,742,180	+		PGA1_c16730	0.47	-0.3
1,742,180	+		PGA1_c16730	0.47	+1.1
1,742,180	+		PGA1_c16730	0.47	+0.9
1,742,183	-		PGA1_c16730	0.47	+0.0
1,742,188	-		PGA1_c16730	0.48	+1.2
1,742,188	-		PGA1_c16730	0.48	+0.1
1,742,188	-		PGA1_c16730	0.48	-0.1
1,742,293	+		PGA1_c16730	0.62	-0.6
1,742,314	+		PGA1_c16730	0.65	+1.3
1,742,494	-		PGA1_c16730	0.89	+0.6
1,742,503	-				+0.5
1,742,533	+				-0.3
1,742,592	+				+0.4
1,742,821	-				+2.9
1,742,821	-				+0.2