Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16670

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
1,734,230	-		PGA1_c16640	0.89	+0.2
1,734,285	-				+0.9
1,734,290	-				-0.7
1,734,290	-				-0.1
1,734,328	+				-1.1
1,734,336	-				+2.4
1,734,406	-				+0.5
1,734,449	+				+2.0
1,734,493	-				+0.2
1,734,495	+				-0.1
1,734,501	-				+1.3
1,734,503	-				-0.7
1,734,503	-				+1.9
1,734,503	-				-1.7
1,734,503	-				+0.4
1,734,534	+				-1.1
1,734,594	-				+2.1
1,734,594	-				-1.5
1,734,635	+				+0.9
1,734,635	+				-1.0
1,734,638	-				-0.4
1,734,686	+				+0.1
1,734,714	-				-0.3
1,734,778	+				-1.1
1,734,790	-				-1.0
1,734,837	-				-1.3
1,734,843	+				+0.9
1,734,843	+				+0.9
1,734,891	+				-1.3
1,734,891	+				+0.1
1,734,923	+				+1.9
1,734,923	+				+1.4
1,734,926	-				+0.8
1,734,931	-				-1.3
1,734,931	-				+2.4
1,734,931	-				+0.3
1,735,134	-				+2.3
1,735,147	+				+1.6
1,735,147	+				+0.6
1,735,155	-				+2.2
1,735,157	+				+0.6
1,735,157	+				+0.5
1,735,157	+				-0.1
1,735,157	+				-1.0
1,735,157	+				+0.2
1,735,157	+				+1.2
1,735,157	+				-0.8
1,735,157	+				+1.6
1,735,157	+				+2.1
1,735,157	+				-1.5
1,735,157	+				-0.9
1,735,157	+				-0.5
1,735,157	+				+0.5
1,735,157	+				-0.9
1,735,157	+				-0.5
1,735,157	+				-1.5
1,735,157	+				-1.9
1,735,157	+				+2.4
1,735,157	+				-1.7
1,735,157	+				-0.9
1,735,157	+				+2.4
1,735,157	+				-0.4
1,735,157	+				+3.3
1,735,157	+				+0.3
1,735,157	+				+0.3
1,735,157	+				-0.3
1,735,157	+				-2.1
1,735,157	+				+0.9
1,735,157	+				+0.6
1,735,157	+				+2.0
1,735,157	+				+0.4
1,735,157	+				+0.1
1,735,157	+				+1.2
1,735,157	+				-0.7
1,735,157	+				+0.7
1,735,157	+				-0.3
1,735,157	+				+0.6
1,735,157	+				+1.3
1,735,162	+				+0.9
1,735,165	-				-0.1
1,735,165	-				+0.4
1,735,165	-				+0.7
1,735,165	-				-0.5
1,735,165	-				-0.5
1,735,165	-				-0.4
1,735,165	-				-1.6
1,735,165	-				-1.3
1,735,165	-				+1.3
1,735,165	-				+0.6
1,735,165	-				-1.5
1,735,165	-				-2.7
1,735,165	-				-1.0
1,735,165	-				-0.2
1,735,165	-				+0.9
1,735,165	-				+0.3
1,735,165	-				+1.4
1,735,165	-				+0.9
1,735,165	-				+1.5
1,735,165	-				+0.0
1,735,165	-				-0.7
1,735,165	-				+1.5
1,735,165	-				-1.9
1,735,165	-				-0.3
1,735,165	-				-0.8
1,735,165	-				+0.9
1,735,165	-				-1.9
1,735,165	-				-0.1
1,735,165	-				+0.5
1,735,165	-				-0.8
1,735,165	-				-2.1
1,735,165	-				+0.4
1,735,165	-				+0.2
1,735,165	-				+0.3
1,735,165	-				-1.7
1,735,165	-				-0.9
1,735,165	-				-0.1
1,735,165	-				-2.3
1,735,165	-				-1.3
1,735,165	-				+0.2
1,735,165	-				+0.1
1,735,165	-				-0.7
1,735,165	-				-0.1
1,735,165	-				-1.6
1,735,165	-				+0.5
1,735,165	-				-0.5
1,735,165	-				-0.7
1,735,165	-				-0.6
1,735,165	-				-1.1
1,735,165	-				-1.8
1,735,165	-				+0.8
1,735,165	-				-1.4
1,735,165	-				-0.3
1,735,165	-				-1.5
1,735,165	-				+0.3
1,735,165	-				-0.1
1,735,165	-				-2.9
1,735,207	+				-0.7
1,735,217	+				+0.1
1,735,222	+				+0.1
1,735,225	-				-1.2
1,735,310	+				-1.7
1,735,351	-		PGA1_c16670	0.11	-0.6
1,735,499	+		PGA1_c16670	0.22	+0.9
1,735,524	-		PGA1_c16670	0.24	-0.9
1,735,634	+		PGA1_c16670	0.33	+0.4
1,735,694	-		PGA1_c16670	0.38	-1.9
1,735,703	+		PGA1_c16670	0.39	+0.3
1,735,708	+		PGA1_c16670	0.39	+0.9
1,735,708	+		PGA1_c16670	0.39	-2.3
1,735,726	-		PGA1_c16670	0.40	+0.9
1,735,728	-		PGA1_c16670	0.41	+1.4
1,735,739	+		PGA1_c16670	0.41	+2.0
1,735,770	-		PGA1_c16670	0.44	+0.1
1,735,777	-		PGA1_c16670	0.44	+0.3
1,735,787	+		PGA1_c16670	0.45	-1.6
1,735,793	-		PGA1_c16670	0.46	+0.5
1,735,795	-		PGA1_c16670	0.46	+0.2
1,735,839	-		PGA1_c16670	0.49	+0.2
1,735,893	+		PGA1_c16670	0.54	-0.1
1,735,901	-		PGA1_c16670	0.54	-0.1
1,735,988	+		PGA1_c16670	0.61	+2.7
1,736,096	+		PGA1_c16670	0.70	+1.3
1,736,104	-		PGA1_c16670	0.71	-0.1
1,736,180	+		PGA1_c16670	0.77	-0.8
1,736,200	-		PGA1_c16670	0.78	+1.0
1,736,200	-		PGA1_c16670	0.78	+0.9
1,736,268	-		PGA1_c16670	0.84	+0.9
1,736,281	-		PGA1_c16670	0.85	+0.9
1,736,327	+		PGA1_c16670	0.88	+2.1
1,736,329	+		PGA1_c16670	0.89	+0.6
1,736,335	+		PGA1_c16670	0.89	+0.7
1,736,409	-				-0.6
1,736,426	-				-0.7
1,736,520	+				+1.1
1,736,527	+				+1.4
1,736,532	+				+0.2
1,736,535	-				+1.9
1,736,584	+				-0.7
1,736,584	+				-1.8
1,736,592	-				-2.0
1,736,595	+				-0.5
1,736,605	+				+1.4
1,736,640	+		PGA1_c16680	0.12	-0.1
1,736,640	+		PGA1_c16680	0.12	-1.5
1,736,640	+		PGA1_c16680	0.12	-0.0
1,736,640	+		PGA1_c16680	0.12	+0.1
1,736,648	-		PGA1_c16680	0.12	+1.4
1,736,648	-		PGA1_c16680	0.12	+0.9
1,736,648	-		PGA1_c16680	0.12	-0.3
1,736,971	+		PGA1_c16680	0.43	+1.1
1,736,989	-		PGA1_c16680	0.44	+0.4
1,736,994	-		PGA1_c16680	0.45	-0.5
1,737,148	+		PGA1_c16680	0.59	+0.6
1,737,156	-		PGA1_c16680	0.60	-0.3
1,737,156	-		PGA1_c16680	0.60	-0.6
1,737,156	-		PGA1_c16680	0.60	+0.5
1,737,156	-		PGA1_c16680	0.60	+0.4
1,737,185	+		PGA1_c16680	0.63	+1.9
1,737,185	+		PGA1_c16680	0.63	+1.2
1,737,258	+		PGA1_c16680	0.70	+0.3
1,737,337	-		PGA1_c16680	0.77	+0.3
1,737,377	-		PGA1_c16680	0.81	+0.4
1,737,408	+		PGA1_c16680	0.84	-2.1