Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11490

Experiment: m.b. Gentamicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.004 mg/ml
1,186,450	-		PGA1_c11470	0.18	+0.3
1,186,507	-		PGA1_c11470	0.31	+2.8
1,186,512	-		PGA1_c11470	0.32	+0.6
1,186,617	-		PGA1_c11470	0.55	-0.3
1,186,719	-		PGA1_c11470	0.78	+0.5
1,186,772	+		PGA1_c11470	0.90	+1.4
1,186,782	+				-1.0
1,186,785	-				+0.5
1,186,785	-				+0.3
1,186,785	-				-0.6
1,186,785	-				+1.1
1,186,897	-		PGA1_c11480	0.16	-0.2
1,186,897	-		PGA1_c11480	0.16	+1.6
1,186,899	-		PGA1_c11480	0.16	-0.4
1,186,961	+		PGA1_c11480	0.28	-1.0
1,186,999	-		PGA1_c11480	0.35	+2.0
1,187,032	+		PGA1_c11480	0.41	+1.1
1,187,077	+		PGA1_c11480	0.50	-0.6
1,187,197	-		PGA1_c11480	0.72	+1.1
1,187,278	-		PGA1_c11480	0.88	-1.3
1,187,301	-				-0.2
1,187,303	+				+1.3
1,187,311	-				+1.0
1,187,311	-				-1.4
1,187,313	+				+3.2
1,187,337	+				+0.4
1,187,337	+				-0.8
1,187,397	+				+0.2
1,187,405	-				-1.4
1,187,405	-				+1.7
1,187,515	+		PGA1_c11490	0.19	+1.3
1,187,515	+		PGA1_c11490	0.19	+0.7
1,187,515	+		PGA1_c11490	0.19	-0.1
1,187,518	-		PGA1_c11490	0.19	-2.0
1,187,523	-		PGA1_c11490	0.20	+1.6
1,187,542	+		PGA1_c11490	0.22	+1.2
1,187,595	-		PGA1_c11490	0.27	-0.2
1,187,666	-		PGA1_c11490	0.35	+0.4
1,187,707	+		PGA1_c11490	0.39	+1.0
1,187,725	+		PGA1_c11490	0.41	-0.0
1,187,725	+		PGA1_c11490	0.41	+0.4
1,187,735	-		PGA1_c11490	0.42	+0.9
1,187,740	-		PGA1_c11490	0.43	-0.0
1,187,740	-		PGA1_c11490	0.43	+0.2
1,187,896	+		PGA1_c11490	0.59	+1.0
1,188,001	+		PGA1_c11490	0.70	+0.4
1,188,001	+		PGA1_c11490	0.70	+0.7
1,188,001	+		PGA1_c11490	0.70	+1.3
1,188,001	+		PGA1_c11490	0.70	+1.4
1,188,001	+		PGA1_c11490	0.70	+0.7
1,188,001	+		PGA1_c11490	0.70	+1.4
1,188,001	+		PGA1_c11490	0.70	+0.6
1,188,009	-		PGA1_c11490	0.71	-0.1
1,188,009	-		PGA1_c11490	0.71	-0.0
1,188,009	-		PGA1_c11490	0.71	-0.1
1,188,009	-		PGA1_c11490	0.71	-1.4
1,188,021	+		PGA1_c11490	0.72	+0.7
1,188,295	-				-0.1
1,188,332	+				-0.4
1,188,340	-				+0.3
1,188,374	+				+1.7
1,188,442	-				+1.7
1,188,442	-				+1.5
1,188,442	-				+0.7
1,188,587	+		PGA1_c11500	0.11	+0.2
1,188,638	+		PGA1_c11500	0.15	-0.0
1,188,654	+		PGA1_c11500	0.17	-1.8
1,188,654	+		PGA1_c11500	0.17	+1.6
1,188,766	-		PGA1_c11500	0.26	-0.3
1,188,879	+		PGA1_c11500	0.35	-1.0
1,188,887	-		PGA1_c11500	0.36	-1.6
1,188,889	+		PGA1_c11500	0.36	-1.1
1,189,079	+		PGA1_c11500	0.52	-0.6
1,189,243	-		PGA1_c11500	0.65	-1.8
1,189,251	-		PGA1_c11500	0.66	-2.0